Refinement Database

Database on Refinement of Housing, Husbandry, Care, and Use of Animals in Research

This database, created in 2000, is updated every four months with newly published scientific articles, books, and other publications related to improving or safeguarding the welfare of animals used in research.

Tips for using the database:

  • This landing page displays all of the publications in the database.
  • Use the drop-down menus to filter these publications by Animal Type, Setting, and/or Topic.
  • Clicking on a parent category (e.g., Rodent) will include publications relating to all the items in that category (e.g., Chinchilla, Gerbil, Guinea Pig, etc.).
  • You may also add a keyword to further narrow your search.
  • Please note that at this time, only publications dated 2010 or later (with some exceptions) can be filtered by Animal Type and Topic, and only publications dated 2020 or later (with some exceptions) can be filtered by Setting. Most publications older than 2010 can only be searched by keyword. 
Bacon, H. 2018. Behaviour-based husbandry—A holistic approach to the management of abnormal repetitive behaviors. Animals 8(7), 103.

The field of zoo animal welfare science has developed significantly over recent years. However despite this progress in terms of scientific research, globally, zoo animals still face many welfare challenges. Recently, animal welfare frameworks such...

Clegg, I. 2018. Cognitive bias in zoo animals: An optimistic outlook for welfare assessment. Animals 8(7), 104.

Cognitive bias testing measures how emotional states can affect cognitive processes, often described using the “glass half-full/half-empty” paradigm. Classical or operant conditioning is used to measure responses to ambiguous cues, and it has been reported...

Wolfensohn, S., Shotton, J., Bowley, H. et al. 2018. Assessment of welfare in zoo animals: Towards optimum quality of life. Animals 8(7), 110.

Zoos are required to maintain a high standard of animal welfare, and this can be assessed using a combination of resource-based and animal-based indices usually divided into behavioural indicators, physiological indicators and clinical/pathological signs. Modern...

Salas, M., Manteca, X., Abáigar, T. et al. 2018. Using farm animal welfare protocols as a base to assess the welfare of wild animals in captivity—case study: Dorcas gazelles (Gazella dorcas). Animals 8(7), 111.

There is a lack of protocols specifically developed for the assessment of welfare of wild animals in captivity, even when it is known that providing good standards of welfare is important. The aim of this...

Chotard, H., Ioannou, S., Davila-Ross, M. 2018. Infrared thermal imaging: Positive and negative emotions modify the skin temperatures of monkey and ape faces. American Journal of Primatology 80(5), e22863.

Facial thermography has enabled researchers to noninvasively and continuously measure the changes of a range of emotional states in humans. The present work used this novel technology to study the effect of positive and negative...

Cabana, F., Maguire, R., Hsu, C-D. et al. 2018. Identification of possible nutritional and stress risk factors in the development of marmoset wasting syndrome. Zoo Biology 37(2), 98–106.

Marmoset wasting syndrome (MWS) describes a series of symptoms in callitrichids that lead to general weakness and a failure to thrive in captive conditions such as zoological institutions. Though the cause of MWS has not...

Duarte, R. B., Maior, R. S., Barros, M. 2018. Behavioral and cortisol responses of adult marmoset monkeys (Callithrix penicillata) to different home-cage social disruption intervals. Applied Animal Behaviour Science 201, 117-124.

Social separation is an increasingly used strategy to experimentally assess psychogenic stress in nonhuman primates, yet it is also inherently required for captive management. Surprisingly, little is known on the effects of an individual left...

Gottlieb, D. H., Del Rosso, L, Sheikhi, F. et al. 2018. Personality, environmental stressors, and diarrhea in Rhesus macaques: An interactionist perspective. American Journal of Primatology 80(12), e22908.

Previous research has repeatedly shown both personality and psychological stress to predict gastrointestinal disorders and chronic diarrhea in humans. The goal of the present research was to evaluate the role of personality, as well as...

Linden, J.B., Capitanio, J.P., McCowan, B. et al. 2018. Coping style and cortisol levels in infancy predict hair cortisol following new group formation in captive rhesus macaques (Macaca mulatta). American Journal of Primatology 80(12), e22938.

Social instability in primate groups has been used as a model to understand how social stress affects human populations. While it is well established that individual cercopithecines have different temperaments or personalities, little is known...

Pomerantz, O., Nyandwi, S., Baker, K., 2018. Providing feeding enrichment by hand mitigates anxiety among laboratory-housed rhesus macaques (Macaca mulatta). American Journal of Primatology 80(S1), 20 (40th Meeting of the American Society of Primatologists Scientific Program, Abstract #26).

Some husbandry procedures may be perceived as aversive by cage‐housed rhesus macaques. We assessed whether providing feeding enrichment by hand as opposed to placing it on a caging surface decreases anxiety responses to daily husbandry...

Dettmer, A. M., Slonecker, E., Suomi, S. J. et al. 2018. Dams’ social behaviour and long-term cortisol profiles in response to their infants being nursery-reared. American Journal of Primatology 80(S1), 33 (40th Meeting of the American Society of Primatologists Scientific Program, Abstract #67).

The influence of early rearing experiences on infants’ social and neuroendocrine development is well characterized. However, little is known about the effects of nursery rearing (NR) on the infants’ mothers. Such information is important in...

Worlein, J. M., Kroeker, R., Lee, G. H. et al. 2018. Behavioral and physiological outcomes in nursery-reared pigtailed macaques (Macaca nemestrina). American Journal of Primatology 80(S1), 34 (40th Meeting of the American Society of Primatologists Scientific Program, Abstract #92).

The Infant Primate Research Laboratory at the Washington National Primate Research Center incorporates a number of rearing techniques aimed at assuring the welfare and enhancing behavioral outcomes for infants reared in the nursery. We recently...

Lane, J. F. 2018. Nursery rearing macaques – An overview from a veterinary perspective. American Journal of Primatology 80(S1), 34 (40th Meeting of the American Society of Primatologists Scientific Program, Abstract #93).

A variety of clinical and research scenarios require nursery rearing of infant macaques. Nursery rearing practices vary across institutions and are conducted with a range of personnel and facility resources. Caretakers, veterinarians, research and behavioral...

Coleman, K., Robertson, N. D. 2018. Training non-lactating rhesus macaques to act as foster mothers. American Journal of Primatology 80(S1), 34-35 (40th Meeting of the American Society of Primatologists Scientific Program, Abstract #94).

There can be psychological and physiological consequences resulting from nursery rearing rhesus macaques. To reduce the need for nursery rearing, orphaned infants are often placed with lactating foster mothers. Unfortunately, a supply of these lactating...

Bloomsmith, M. A., Truelove, M. A., Cowan‐Brown, J. et al. 2018. Comparing abnormal and fear-related behaviour under two nursery rearing conditions for infant rhesus macaques. American Journal of Primatology 80(S1), 35 (40th Meeting of the American Society of Primatologists Scientific Program, Abstract #95).

Two nursery rearing strategies for infant rhesus macaques (Macaca mulatta) were compared to measure effects on abnormal and fear‐related behavior. Changes made from the standard nursery‐rearing procedures (SN) included earlier exposure to peers, frequent peer‐group...

Pierre, P. J., Sullivan, J., Rosga, M. et al. 2018. Long term behavioral and clinical outcomes for nursery reared macaques. American Journal of Primatology 80(S1), 70 (40th Meeting of the American Society of Primatologists Scientific Program, Abstract #96).

Nursery rearing (NR) as an experimental manipulation has informed our understanding of the basic bio‐behavioral mechanisms of development. Nursery rearing also occurs for clinical support of infants that fail to thrive or are rejected by...

Baker, K. C., Ruhde, A. 2018. Macroenvironmental effects on the well-being of singly-caged male rhesus macaques (Macaca mulatta). American Journal of Primatology 80(S1), 47 (40th Meeting of the American Society of Primatologists Scientific Program, Abstract #146).

Determining the effects of the macroenvironment on the welfare of nonhuman primates can help identify their needs and guide their behavioral management. We evaluated the behavior of 37 adult male rhesus macaques in two housing...

Hanniba, D., Beisner, B., Nathman, A. et al. 2018. Removals based on low within-matriline relatedness can reduce severe aggression in captive rhesus macaques. American Journal of Primatology 80(S1), 48 (40th Meeting of the American Society of Primatologists Scientific Program, Abstract #151).

Previous observational research of captive rhesus macaques suggests that higher coefficients of relatedness within matrilines are associated with lower rates of severe within‐matriline aggression and more cohesive grooming communities. We tested whether experimental removals targeted...

Unakafov, A. M., Möller, S., Kagan, I. et al. 2018. Using imaging photoplethysmography for heart rate estimation in non-human primates. PLOS ONE 13(8), e0202581.

For humans and for non-human primates heart rate is a reliable indicator of an individual’s current physiological state, with applications ranging from health checks to experimental studies of cognitive and emotional state. In humans, changes...

Witham, C. L. 2018. Automated face recognition of rhesus macaques. Journal of Neuroscience Methods 300, 157-165.

Background: Rhesus macaques are widely used in biomedical research. Automated behavior monitoring can be useful in various fields (including neuroscience), as well as having applications to animal welfare but current technology lags behind that developed...

Cronin, K. A., Bethell, E. J., Jacobson, S. L. et al. 2018. Evaluating mood changes in response to anthropogenic noise with a response-slowing task in three species of zoo-housed primates. Animal Behavior and Cognition 5(2), 209–221.

In the zoo environment, anthropogenic noise is common as sound levels fluctuate due to visitors, construction, habitat design, and special events. In this study, changes in the mood of three species of zoo-housed primates in...

Semrau, A., Gerold, S., Frick, J.S. et al. 2017. Non-invasive detection and successful treatment of a Helicobacter pylori infection in a captive rhesus macaque. Laboratory Animals 51(2), 208-211.

Gastritis is a commonly diagnosed condition in non-human primates used in biomedical research. As in humans, Helicobacter pylori infection may cause gastritis. The following report presents a method of non-invasive detection and a successful treatment...

Krebs, B. L., Torres, E., Chesney, C. et al. 2017. Applying behavioral conditioning to identify anticipatory behaviors. Journal of Applied Animal Welfare Science 20(2), 155-175.

The ability to predict regular events can be adaptive for nonhuman animals living in an otherwise unpredictable environment. Animals may exhibit behavioral changes preceding a predictable event; such changes reflect anticipatory behavior. Anticipatory behavior is...

Theil, J. H., Beisner, B. A., Hill, A. E. et al. 2017. Effects of human management events on conspecific aggression in captive rhesus macaques (Macaca mulatta). JAALAS 56(2), 122-130.

Conspecific aggression in outdoor-housed rhesus macaques (Macaca mulatta) at primate research facilities is a leading source of trauma and can potentially influence animal wellbeing and research quality. Although aggression between macaques is a normal part...

Wall, E. L., Hartley, M. 2017. Assessing enclosure design and husbandry practices for successful keeping and breeding of the Burmese brow antlered deer (Eld’s deer, Rucervus eldii thamin) in European zoos. Zoo Biology 36(3), 201–212.

The endangered Burmese brow antlered deer (Rucervus eldii thamin) is a medium sized tropical cervid kept in a number of European zoos. Studbook data and anecdotal reports have suggested that this species suffers from poor...