Refinement Database

Database on Refinement of Housing, Husbandry, Care, and Use of Animals in Research

This database, created in 2000, is updated every four months with newly published scientific articles, books, and other publications related to improving or safeguarding the welfare of animals used in research.

Tips for using the database:

  • This landing page displays all of the publications in the database.
  • Use the drop-down menus to filter these publications by Animal Type, Setting, and/or Topic.
  • Clicking on a parent category (e.g., Rodent) will include publications relating to all the items in that category (e.g., Chinchilla, Gerbil, Guinea Pig, etc.).
  • You may also add a keyword to further narrow your search.
  • Please note that at this time, only publications dated 2010 or later (with some exceptions) can be filtered by Animal Type and Topic, and only publications dated 2020 or later (with some exceptions) can be filtered by Setting. Most publications older than 2010 can only be searched by keyword. 
Song, Y., Xie, S. 2024. Effects of substrate roughening on the swimming performance of Schizothorax wangchiachii (Fang, 1936) in the Heishui River: Implications for vertical slot fishway design. Journal of Fish Biology 104(2), 473–483.

Re-establishing the natural connectivity of rivers using fishways may mitigate the unfavourable effects of dam construction on riverine biodiversity and freshwater fish populations. Knowledge of the swimming performance of target species in specific regions is...

Robinson, L. M., Weiss, A. (Eds.) 2023. Nonhuman Primate Welfare: From History, Science, and Ethics to Practice. Springer, Cham, Switzerland. 671 p.

This volume reviews the broad topic of welfare in nonhuman primates under human care. Chapters detail the history of primates in captivity, ethical and legal issues surrounding the use of nonhuman primates as entertainment or...

Brando, S., Vitale, A., Bacon, M. 2023. Promoting good nonhuman primate welfare outside regular working hours. Animals 13(8), 1423.

Promoting good primate welfare outside of daylight hours is an important task. The responsibility to provide a complex environment and environmental enrichment is an essential element of primate wellbeing programs that should be approached from...

Cavallino, L., Rincón, L., Scaia, M. F. 2023. Social behaviors as welfare indicators in teleost fish. Frontiers in Veterinary Science 10, 1050510.

Animal welfare is a key issue not only for aquaculture industry and food production, but also for daily husbandry practices in research topics related to physiology in wild and farmed animals. In this context, teleost...

Fuller, M. 2023. Sensory enrichment for the common marmoset (Callithrix jacchus). Animal Technology and Welfare 22(1), 44–46.

Common marmosets (Callithrix jacchus) are New World primates that are found within the coastal rainforests of North East (NE) Brazil. They are a multisensory species, relying on all their senses to survive. It is the...

Matrai, E., Chan, H. Y. A., Leung, F. M. et al. 2023. Point for enrichment, point for welfare—Testing use of a laser pointer with Arapaima gigas. Animals 13(8), 1370.

The arapaima (Arapaima gigas) is one of the largest freshwater fish species, known to exceed 3 m in total length. It is listed as Data Deficient by the IUCN. A. gigas is native to the...

Pallieres, C. G. D., Rose, P. E. 2023. Two’s company, three species is a crowd? A webcam-based study of the behavioural effects of mixed-species groupings in the wild and in the zoo. PLOS ONE 18(4), e0284221.

Mixed species exhibits in zoos are used to create larger, more stimulating environments to support naturalistic interactions between species. In the wild, mixed species groups are observed as having lower rates of vigilance, presumably due...

Rucinque, D. S., van de Vis, H., Reimert, H. et al. 2023. Pre-slaughter stunning of farmed Atlantic halibut in CO2-saturated seawater: Assessment of unconsciousness by electroencephalography (EEG). Animals 13(12), 1993.

As fish welfare becomes a growing concern, it is important to ensure humane treatment during slaughter. This study aimed to assess the onset of unconsciousness in Atlantic halibut immersed in CO2-saturated seawater through electroencephalography (EEG)...

Williams, E., Hunton, V., Hosey, G. et al. 2023. The impact of visitors on non-primate species in zoos: A quantitative review. Animals 13(7), 1178.

Visitors are a prominent feature in the lives of zoo animals, and their presence can cause a range of impacts on zoo animals (typically classed as positive, negative or neutral impacts), commonly referred to as...

Zhou, X., Lv, Q., Qin, Y. et al. 2023. Effects of social stress on the welfare of captive male Alpine musk deer: Stereotypic behavior, fecal cortisol, and musk secretion. Applied Animal Behaviour Science 258, 105828.

Wild Alpine musk deer (Moschus chrysogaster), which are native to the Qinghai-Tibet Plateau and surrounding areas, have been kept in captivity as an effective way to conserve musk deer ex situ and sustainably utilize musk...

Bombal, E., Manteca, X., Tallo-Parra, O. 2023. A protocol to assess the welfare of Patagonian huemul (Hippocamelus bisulcus) in conservation centers. Animals 13(15), 2495.

Animal-welfare-assessment protocols are important for identifying welfare problems in conservation programs. This study aimed to develop a baseline welfare protocol for the assessment of the welfare of Patagonian huemuls (Hippocamelus bisulcus) in conservation centers. This...

Brando, S., Norman, M. 2023. Handling and training of wild animals: Evidence and ethics-based approaches and best practices in the modern zoo. Animals 13(14), 2247.

There is an ethical responsibility to provide all animals living in human care with optimal and positive well-being. As animals living in zoos and aquariums frequently interact with their human caregivers as part of their...

Campbell-Ward, M. 2023. Quality-of-life assessments in zoo animals: Not just for the aged and charismatic. Animals 13(21), 3394

Zoos should aim to provide all of their animals with a good quality of life (QoL) throughout all life stages. In parallel with the evolution of QoL assessment questionnaires and tools in human and domestic...

Smith, S. A. 2023. Fish welfare in public aquariums and zoological collections. Animals 13(16), 2548.

A wide variety of fish species have been displayed in public aquariums and zoological collections for over 150 years. Though the issue of pain perception in fish is still being debated, there is no disagreement...

Wowk, Z. M., Behie, A. M. 2023. The influence of olfactory enrichment on the behavior of two captive New World primates: Black-capped capuchin (Sapajus apella) and common marmoset (Callithrix jacchus). Zoo Biology 42(2), 231–242.

Environmental enrichment is an animal husbandry principle that seeks to provide the stimuli necessary for the optimal physiological and psychological well-being of animals. Due to primates having highly developed visual systems, there have been limited...

Brereton, J., Rose, P. 2022. An evaluation of the role of 'biological evidence' in zoo and aquarium enrichment practices. Animal Welfare 31(1), 13-26.

Evidence-based approaches are key to advancing all areas of zoo and aquarium practice. Output from empirical study must be disseminated to those within the industry so that results can support changes to husbandry and management...

Brucks, D., Drews, B., Ulbrich, S. E. 2022. Exploring the social network of European roe deer (Capreolus capreolus) in captivity. Applied Animal Behaviour Science 246, 105526.

Socially flexible species might be at an advantage when facing environmental unpredictability, human-induced rapid environmental changes, or unnatural conditions such as encountered in captivity. The European roe deer (Capreolus capreolus) was originally described as solitarily...

Medina, A. 2022. Creative enrichment for nonhuman primates. Laboratory Animal Science Professional 10(1) (January/February), 42-43.

Providing novel and creative enrichments for nonhuman primates improves their mental wellbeing and is thus an important aspect of all husbandry programs. These enrichments are often presented through variations in diet, toys, and environmental features...

Buchanan, K. 2022. DIY: Ants on a log. Laboratory Animal Science Professional 10(1) (January/February), 44.

This traditional snack has a variety of options for NHP enrichment. From fruit to cereals, get creative with the “ants” and remember to consider different fillings for the celery log.

Aird, T., Pierre, P. J. 2022. Refining enrichment toy interactions in common marmosets through usage assessment. Laboratory Animal Science Professional 10(1) (January/February), 64-66.

Apart from species-typical foraging behavior, a large body of the literature addresses enriching captive marmoset environments through structural and housing adaptations to promote activity and exploration. These studies simulate vertical elements and climbing substrates in...

Lutz, C. K., Coleman, K., Hopper, L.M. et al. 2022. Nonhuman primate abnormal behavior: Etiology, assessment, and treatment. American Journal of Primatology 84(6), e23380.

Across captive settings, nonhuman primates may develop an array of abnormal behaviors including stereotypic and self-injurious behavior. Abnormal behavior can indicate a state of poor welfare, since it is often associated with a suboptimal environment...

Knaebe, B., Weiss, C. C., Zimmermann, J. et al. 2022. The promise of behavioral tracking systems for advancing primate animal welfare. Animals 12(13), 1648.

Recent years have witnessed major advances in the ability of computerized systems to track the positions of animals as they move through large and unconstrained environments. These systems have so far been a great boon...

Trondrud, L. M., Ugland, C., Ropstad, E. et al. 2022. Stress responses to repeated captures in a wild ungulate. Scientific Reports 12(1), 16289.

While capture-mark-recapture studies provide essential individual-level data in ecology, repeated captures and handling may impact animal welfare and cause scientific bias. Evaluating the consequences of invasive methodologies should be an integral part of any study...

Prentice, P. M., Houslay, T. M., Wilson, A. J. 2022. Exploiting animal personality to reduce chronic stress in captive fish populations. Frontiers in Veterinary Science 9, 1046205.

Chronic stress is a major source of welfare problems in many captive populations, including fishes. While we have long known that chronic stress effects arise from maladaptive expression of acute stress response pathways, predicting where...

Santymire, R. M., Young, M., Lenihan, E. et al. 2022. Preliminary investigation into developing the use of swabs for skin cortisol analysis for the ocean sunfish (Mola mola). Animals 12(20), 2868.

The ocean sunfish (mola; Mola mola) is the heaviest bony fish in the world. This slow-moving fish often is injured by fishing boats that use drift gillnets attributing to its listing as Vulnerable by the...