Refinement Database

Database on Refinement of Housing, Husbandry, Care, and Use of Animals in Research

This database, created in 2000, is updated every four months with newly published scientific articles, books, and other publications related to improving or safeguarding the welfare of animals used in research.

Tips for using the database:

  • This landing page displays all of the publications in the database.
  • Use the drop-down menus to filter these publications by Animal Type, Setting, and/or Topic.
  • Clicking on a parent category (e.g., Rodent) will include publications relating to all the items in that category (e.g., Chinchilla, Gerbil, Guinea Pig, etc.).
  • You may also add a keyword to further narrow your search.
  • Please note that at this time, only publications dated 2010 or later (with some exceptions) can be filtered by Animal Type and Topic, and only publications dated 2020 or later (with some exceptions) can be filtered by Setting. Most publications older than 2010 can only be searched by keyword. 
Rucinque, D. S., van de Vis, H., Reimert, H. et al. 2023. Pre-slaughter stunning of farmed Atlantic halibut in CO2-saturated seawater: Assessment of unconsciousness by electroencephalography (EEG). Animals 13(12), 1993.

As fish welfare becomes a growing concern, it is important to ensure humane treatment during slaughter. This study aimed to assess the onset of unconsciousness in Atlantic halibut immersed in CO2-saturated seawater through electroencephalography (EEG)...

Seck, M., Jobling, R., Brown, A. F. 2023. Trialling locally made, low-cost bits to improve bit-related welfare problems in cart horses: Findings from a study in Senegal. Animals 13(1), 2.

Bits used for cart horses in Senegal are typically made of recovered construction iron and often have defects related to design, shape, fit and metal quality. Consequently, there is widespread presence of bit-related oral injury...

Seganfreddo, S., Fornasiero, D., De Santis, M. et al. 2023. A pilot study on behavioural and physiological indicators of emotions in donkeys. Animals 13(9), 1466.

Recognizing animal emotions is critical to their welfare and can lead to a better relationship with humans and the environment, especially in a widespread species like the donkey, which is often prone to welfare issues...

Zare, M., Heidari, E., Hosseini Choupani, S. M. et al. 2023. The recovery time between early mild stress and final acute stress affects survival rate, immunity, health, and physiology of oscar (Astronotus ocellatus). Animals 13(10), 1606.

This study investigated how the time interval between the last EMS (netting) and the acute confinement stress (AC stress) at the end of the experiment can influence growth, haematology, blood biochemistry, immunological response, antioxidant system...

Zollinger, A., Wyss, C., Bardou, D. et al. 2023. Social box: A new housing system increases social interactions among stallions. Animals 13(8), 1408.

In domestic conditions, adult stallions are mostly housed individually in internal stables to reduce the risk of injuries during social interactions. Social deprivation in horses results in physiological stress and behavioural problems. The aim of...

Jones, M, Alexander, M. E., Lightbody, S. et al. 2023. Influence of social enrichment on transport stress in fish: A behavioural approach. Applied Animal Behaviour Science 262, 105920.

Ornamental fishes are among the most commonly owned companion animals in the world, however, the transportation process during acquisition can result in fishes being exposed to biotic and abiotic conditions which compromise welfare. While many...

Zuliani, L., Esteves Trindade, P. H., Rodrigues Paranhos da Costa, M. J. 2023. Welfare assessment of horses and mules used in commercial beef cattle ranches in Brazil. Applied Animal Behaviour Science 264, 105964.

This study aimed to identify, among the equine welfare indicators included in two available protocols (Assessment Protocol for Horses and AWIN - Welfare Assessment Protocol for Horses), those suitable to assess the welfare of ranch...

Ricci-Bonot, C., Mills, D. S. 2023. Recognising the facial expression of frustration in the horse during feeding period. Applied Animal Behaviour Science 265, 105966.

Horses often present negative emotional states which are frequently poorly recognised, with much of our understanding of horse expressions based on anecdotes, rather than scientific evidence. The aim of this project was to identify potential...

Baßmann, B., Hahn, L., Rebl, A. et al. 2023. Effects of stocking density, size, and external stress on growth and welfare of African catfish (Clarias gariepinus Burchell, 1822) in a commercial RAS. Fishes 8(2), 74.

The effects of semi-intensive (100 kg m−3), intensive (200 kg m−3), and super-intensive (400 kg m−3) stocking densities on the growth and welfare of African catfish (Clarias gariepinus) were investigated under commercial production conditions. Plasma...

Dara, M., Carbonara, P., La Corte, C. et al. 2023. Fish welfare in aquaculture: Physiological and immunological activities for diets, social and spatial stress on Mediterranean aqua cultured species. Fishes 8(8), 414.

Welfare assessment currently is less well-characterized for aquatic animals and the classical methodologies used for terrestrial animals are not adequate to improve our knowledge about fish well-being. Among different approaches, the status of organism responses...

Deng, J., Zhang, H., Wang, Q. et al. 2023. An optimized environmental DNA method to improve detectability of the endangered Sichuan taimen (Hucho bleekeri). Fishes 8(7), 339.

Environmental DNA (eDNA) techniques have emerged as a cost-effective and non-invasive strategy for monitoring the distribution of endangered aquatic species. Despite their numerous advantages, operational uncertainty at each step of the process represents a significant...

Jain, A. K., Tansey, G., Hartig, R. et al. 2023. Trends and treatment approaches for complications in neuroscience experiments with monkey species. Comparative Medicine 73(3), 216–228.

Our goal in this manuscript is to advance the assessment and treatment of monkey species in neuroscience research. We hope to begin a discussion and establish baseline data on how complications are identified and treated...

Alvarado, M. V., Felip, A., Espigares, F. et al. 2023. Unexpected appetitive events promote positive affective state in juvenile European sea bass. Scientific Reports 13(1), 22064.

Some animal species exhibit considerable physiological and behavioural alterations in response to captivity. It has been hypothesized, but rarely tested, that such changes reflect a negative affective state that is associated to this specific context...

Bini de Lima, A. C., Sebastião da Fé, V. C., Palermo Hernandes, M. S. et al. 2023. Olfactory stimulation as environmental enrichment for domestic horses—A review. Animals 13(20), 3180

Horses constantly face several challenges inherent to the domestic environment, and it is common for the expression of their natural behavior to be drastically limited. Environmental enrichment has been suggested as an alternative to improve...

Bortoletti, M., Fonsatti, E., Leva, F. et al. 2023. Influence of transportation on stress response and cellular oxidative stress markers in juvenile meagre (Argyrosomus regius). Animals 13(20), 3288.

In aquaculture, the transportation of live fish is a crucial but stress-inducing practice, necessitating a thorough understanding of its impact on fish welfare. This study aimed to assess the physiological stress response of meagre (Argyrosomus...

Bukhari, S. S. U. H., Parkes, R. S. V. 2023. Assessing the impact of draught load pulling on welfare in equids. Frontiers in Veterinary Science 10.

About 112 million working equids are the source of income for 600 million people globally. Many equids are used for pulling loads (up to 15,000 kg per day) to transport goods. Most of them are associated...

Clemente, G. A., Tolini, C., Boscarino, A. et al. 2023. Farmed fish welfare during slaughter in Italy: Survey on stunning and killing methods and indicators of unconsciousness. Frontiers in Veterinary Science 10.

Information on slaughter procedures for farmed fish in aquaculture is limited, both in Europe and in Italy, due to a general lack of field data. The aim of this study was to gather information on...

da Santa Lopes, T., Costas, B., Ramos-Pinto, L. et al. 2023. Exploring the effects of acute stress exposure on lumpfish plasma and liver biomarkers. Animals 13(23), 3623.

This study aimed to expand knowledge on lumpfish stress physiology by investigating the effects of acute stress on primary (i.e., cortisol) and secondary (e.g., metabolites) stress responses, as well as oxidative stress biomarkers, from stress...

Dara, M., Carbonara, P., La Corte, C. et al. 2023. Fish welfare in aquaculture: Physiological and immunological activities for diets, social and spatial stress on mediterranean aqua cultured species. Fishes 8(8), 414.

Welfare assessment currently is less well-characterized for aquatic animals and the classical methodologies used for terrestrial animals are not adequate to improve our knowledge about fish well-being. Among different approaches, the status of organism responses...

Dybdal, N., Horgan, M., Costa, L. et al. 2023. Equine gunshot euthanasia: Creation of a 3D-printed model with integrated sensors for training. Animals 13(16), 2566.

Challenges and issues related to the use of pentobarbital euthanasia and disposal of animal remains within the US have recently been reviewed. Environmental and public health challenges increasingly necessitate consideration of alternative methods such as...

Fletcher, K. A., Limon, G., Padalino, B. et al. 2023. Impact of social buffering and restraint on welfare indicators during uk commercial horse slaughter. Animals 13(14), 2276.

Current legislation in the United Kingdom stipulates that horses should not be slaughtered within sight of one another. However, abattoir personnel anecdotally report that, for semi-feral horses unused to restraint, co-slaughtering alongside a conspecific could...

Goma, A. A., Uddin, J., Kieson, E. 2023. Lateralised behavioural responses in livestock to environmental stressors: Implications for using infrared thermography to assess welfare conditions. Animals 13(23), 3663.

Lateralised behavioural responses to environmental stressors have become more frequently used as indicators of social welfare in animals. These lateralised behavioural responses are under the control of asymmetrical brain functions as part of the primary...

Gueguen, L., Henry, S., Delbos, M. et al. 2023. Selected acoustic frequencies have a positive impact on behavioural and physiological welfare indicators in thoroughbred racehorses. Animals 13(18), 2970.

(1) Background: Since antiquity, it is considered that sounds influence human emotional states and health. Acoustic enrichment has also been proposed for domestic animals. However, in both humans and animals, effects vary according to the...

Gui, F., Sun, H., Qu, X. et al. 2023. Temperature and dissolved oxygen lead to behavior and respiration changes in juvenile largemouth bass (Micropterus salmoides) during transport. Fishes 8(12), 565.

The study aimed to investigate the effects of temperature and dissolved oxygen on juvenile largemouth bass during transportation. The experiment involved four temperature groups: 20, 15, 10, and 5 °C. We analyzed the effects of...

Olczak, K., Penar, W., Nowicki, J. et al. 2023. The role of sound in livestock farming—Selected aspects. Animals 13(14), 2307.

To ensure the optimal living conditions of farm animals, it is essential to understand how their senses work and the way in which they perceive their environment. Most animals have a different hearing range compared...