Refinement Database

Database on Refinement of Housing, Husbandry, Care, and Use of Animals in Research

This database, created in 2000, is updated every four months with newly published scientific articles, books, and other publications related to improving or safeguarding the welfare of animals used in research.

Tips for using the database:

  • This landing page displays all of the publications in the database.
  • Use the drop-down menus to filter these publications by Animal Type, Setting, and/or Topic.
  • Clicking on a parent category (e.g., Rodent) will include publications relating to all the items in that category (e.g., Chinchilla, Gerbil, Guinea Pig, etc.).
  • You may also add a keyword to further narrow your search.
  • Please note that at this time, only publications dated 2010 or later (with some exceptions) can be filtered by Animal Type and Topic, and only publications dated 2020 or later (with some exceptions) can be filtered by Setting. Most publications older than 2010 can only be searched by keyword. 
Skov, C., Hansen, J. H., Baktoft, H. et al. 2020. A field evaluation of long‐term effects of PIT tagging. Journal of Fish Biology 96(4), 1055-1059.

Passive integrated transponder (PIT)‐tagging is commonly used in behavioural studies of fish, although long‐term evaluations of effects from tagging under natural conditions are scarce. We PIT‐tagged common bream Abramis brama, European perch Perca fluviatilis, pike...

Zemanova, M. A. 2020. Towards more compassionate wildlife research through the 3Rs principles: Moving from invasive to noninvasive methods. Wildlife Biology 2020(1), no page numbers.

Research in ecology and wildlife biology remains crucial for increasing our knowledge and improving species management and conservation in the midst of the current biodiversity crisis. However, obtaining information on population status often involves invasive...

Raspa, F., Tarantola, M., Bergero, D. et al. 2020. Stocking density affects welfare indicators in horses reared for meat production. Animals 10(6), 1103.

Horses kept for meat production are reared in intensive breeding farms. We employed a checklist adapted from the Animal Welfare Indicators (AWIN) assessment protocol. Our evaluation aims to assess whether welfare indicators are influenced by...

Alfonso, S., Sadoul, B., Cousin, X. et al. 2020. Spatial distribution and activity patterns as welfare indicators in response to water quality changes in European sea bass, Dicentrarchus labrax. Applied Animal Behaviour Science 226, 104974.

In aquaculture, fish are exposed to unavoidable stressors that can be detrimental for their health and welfare. However, welfare in farmed fish can be difficult to assess, and, so far, no standardized test has been...

Ruet, A., Arnould, C., Levray, J. et al. 2020. Effects of a temporary period on pasture on the welfare state of horses housed in individual boxes. Applied Animal Behaviour Science 228, 105027.

Domesticated horses mainly live in individual boxes, a housing system reported as compromising animal welfare. A common practice in riding schools involves offering a temporary period on pasture with conspecifics to alleviate the impact of...

Placci, M., Marliani, G., Sabioni, S. et al. 2020. Natural horse boarding vs traditional stable: A comparison of hormonal, hematological and immunological parameters. Journal of Applied Animal Welfare Science 23(3), 366-377.

In the equestrian world, two different types of management can be distinguished: traditional management and natural boarding. The aim of this research was to compare hormonal, hematological and immunological parameters of 47 horses kept in...

Lawrence, M. J., Raby, G. D., Teffer, A. K. et al. 2020. Best practices for non-lethal blood sampling of fish via the caudal vasculature. Journal of Fish Biology 97(1), 4–15.

Blood sampling through the caudal vasculature is a widely used technique in fish biology for investigating organismal health and physiology. In live fishes, it can provide a quick, easy and relatively non‐invasive method for obtaining...

Chu, D. 2020. Malawi cichlids: A colorful 4th R story. Laboratory Animal Science Professional 8(3) (May/June), 24-25.

This article describes the successful rehoming of 60 Malawi cichlids from a vivarium at Stanford University to San Diego Zoo and the California Academy of Sciences.

Barber, J. 2020. Getting to know Siamese fighting fish. Laboratory Animal Science Professional 8(3) (May/June), 26-27.

This article describes the biology, husbandry, and care of Siamese fighting fish (also known as the betta fish) at Columbia University.

Arechavala-Lopez, P., Caballero-Froilán, J. C., Jiménez-García, M. et al. 2020. Enriched environments enhance cognition, exploratory behaviour and brain physiological functions of Sparus aurata. Scientific Reports 10, 11252.

Environmental enrichment is considered as a recommended tool to guarantee or improve the welfare of captive fish. This study demonstrates for the first time that structural environmental enrichment enhances cognition, exploratory behaviour and brain physiological...

Thoré, E. S. J., Brendonck, L., Pinceel, T. 2020. Conspecific density and environmental complexity impact behaviour of turquoise killifish (Nothobranchius furzeri). Fish Biology 97(5), 1448–1461.

Fish models are essential for research in many biological and medical disciplines. With a typical lifespan of only 6 months, the turquoise killifish (Nothobranchius furzeri) was recently established as a time- and cost-efficient model to...

Chapa, J. M., Maschat, K., Iwersen, M. et al. 2020. Accelerometer systems as tools for health and welfare assessment in cattle and pigs – A review. Behavioural Processes 181, 104262.

Welfare assessment has traditionally been performed by direct observation by humans, providing information at only selected points in time. Recently, this assessment method has been questioned, as ‘Precision Livestock Farming’ technologies may be able to...

Gomes Correa, M., Ferreira Rodrigues e Silva, C., Antunes Dias, L. et al. 2020. Welfare benefits after the implementation of slow-feeder hay bags for stabled horses. Journal of Veterinary Behavior 38, 61-66.

Horse confinement is a common practice worldwide. However, preventing horses from grazing and denying them social interaction can compromise their welfare and lead to undesirable consequences. Considering the hypothesis that increasing the forage consumption time...

Davis, K. M., Iwaniuk, M. E., Dennis, R. L. et al. 2020. Effects of grazing muzzles on behavior and physiological stress of individually housed grazing miniature horses. Applied Animal Behaviour Science 231, 105067.

Grazing muzzles are used on obese-prone equids to limit intake of pasture while grazing. However, the length of time grazing muzzles must be worn to prevent weight gain and whether they impede normal grazing behavior...

Davis, K. M., Iwaniuk, M. E., Dennis, R. L. et al. 2020. Effects of grazing muzzles on behavior, voluntary exercise, and physiological stress of miniature horses housed in a herd. Applied Animal Behaviour Science 232, 105108.

Grazing muzzles are a popular and effective management tool used to help prevent weight gain in obese-prone equids. Concerns have been raised over their possible negative impact on horse well-being as muzzles may interfere with...

Guarneros, M., Sánchez-García, O., Martínez-Gómez, M. et al. 2020. The underexplored role of chemical communication in the domestic horse, Equus caballus. Journal of Veterinary Behavior 38, 89-95.

This work provides an overview of the role of chemical communication in horse behavior and addresses the potential usefulness of this knowledge for management practices and animal welfare. First, we present an outline of the...

Hanis, F., Chung, E. L. T., Kamalludin, M. H. et al. 2020. Discovering the relationship between dietary nutrients and cortisol and ghrelin hormones in horses exhibiting oral stereotypic behaviors: A review. Journal of Veterinary Behavior 39, 90-98.

This review focuses on associations of cortisol and the hormone ghrelin on abnormal oral behaviors, predominantly stereotypic behavior, in horses. Abnormal oral behaviors are prevalent in the stabled horse population. Feeding practice and satiety seem...

Janczarek, I., Wiśniewska, M., Wnuk-Pawlak, E. et al. 2020. Effects of horse blankets on the physiological and motion parameters of geriatric horses. Journal of Veterinary Behavior 38, 32-37.

This study analyzed the rectal and surface temperature of the horse's body, its heart rate variability parameters, and the step length when walking and trotting geriatric horses using blankets with various thermoinsulating properties. Twenty-four hot-blooded...

Lundberg, P., Hartmann, E., Roth, L. S. V. 2020. Does training style affect the human-horse relationship? Asking the horse in a separation–reunion experiment with the owner and a stranger. Applied Animal Behaviour Science 233, 105144.

Humans have shared a long history with horses and today we mainly consider horses as companions for sports and leisure activities. Previously, the human perspective of the human-horse relationship has been investigated but there has...

Melvin, M. V., Costello, E., Colpoys, J. D. 2020. Enclosed versus ring feeders: Effects of round-bale feeder type on horse behavior and welfare. Journal of Veterinary Behavior 39, 41-46.

In an effort to minimize the amount of hay wasted from a round bale, horse owners generally surround the bale with a round-bale feeder. While often necessary as a supplemental feed source, this feeding technique...

Mott, R. O., Hawthorne, S. J., McBride, S. D. 2020. Blink rate as a measure of stress and attention in the domestic horse (Equus caballus). Scientific Reports 10(1), 21409.

Measuring animal stress is fundamentally important for assessing animal emotional state and welfare. Conventional methods of quantifying stress (cortisol levels, heart rate/heart rate variability) require specialist equipment and are not instantly available. Spontaneous blink rate...

Rankins, E. M., Wickens, C. L. 2020. A systematic review of equine personality. Applied Animal Behaviour Science 231, 105076.

Examining the literature suggests equine personality is of interest to behavior and welfare scientists and those involved in the equine industry. Study and assessment of personality is critical because of the profound implications certain traits...

Rashid, M., Silventoinen, A., Gleerup, K. B. et al. 2020. Equine Facial Action Coding System for determination of pain-related facial responses in videos of horses. PLOS ONE 15(11), e0231608.

During the last decade, a number of pain assessment tools based on facial expressions have been developed for horses. While all tools focus on moveable facial muscles related to the ears, eyes, nostrils, lips, and...

Ruberto, T., Talbot, J. L., Reddon, A. R. 2020. Head up displays are a submission signal in the group-living daffodil cichlid. Behavioural Processes 181, 104271.

Dominance hierarchies can reduce conflict within social groups and agonistic signals can help to establish and maintain these hierarchies. Behaviours produced by subordinates in response to aggression are often assumed to function as signals of...

Sabiniewicz, A., Tarnowska, K., Świątek, R. et al. 2020. Olfactory-based interspecific recognition of human emotions: Horses (Equus ferus caballus) can recognize fear and happiness body odour from humans (Homo sapiens). Applied Animal Behaviour Science 230, 105072.

Emotional recognition has been demonstrated to occur between members of different species. However, the majority of studies on interspecific communication of emotions so far focused on the senses of vision and hearing while the contribution...