Refinement Database

Database on Refinement of Housing, Husbandry, Care, and Use of Animals in Research

This database, created in 2000, is updated every four months with newly published scientific articles, books, and other publications related to improving or safeguarding the welfare of animals used in research.

Tips for using the database:

  • This landing page displays all of the publications in the database.
  • Use the drop-down menus to filter these publications by Animal Type, Setting, and/or Topic.
  • Clicking on a parent category (e.g., Rodent) will include publications relating to all the items in that category (e.g., Chinchilla, Gerbil, Guinea Pig, etc.).
  • You may also add a keyword to further narrow your search.
  • Please note that at this time, only publications dated 2010 or later (with some exceptions) can be filtered by Animal Type and Topic, and only publications dated 2020 or later (with some exceptions) can be filtered by Setting. Most publications older than 2010 can only be searched by keyword. 
Miller, L. J., Vicino, G. A., Sheftel, J. et al. 2020. Behavioral diversity as a potential indicator of positive animal welfare. Animals 10(7), 1211.

Modern day zoos and aquariums continuously assess the welfare of their animals and use evidence to make informed management decisions. Historically, many of the indicators of animal welfare used to assess the collection are negative...

Nannarone, S., De Monte, V., Arcelli, R. et al. 2020. Gonadectomy in raccoons: Anesthetic and cardiorespiratory effects of two ketamine-based pre-anesthetic protocols before sevoflurane-sufentanil. Animals 10(11), 2110.

Nineteen raccoons were enrolled in this study. The aim was to evaluate and compare the quality of anesthesia and the cardiorespiratory effects following treatment with a ketamine-based combination with either dexmedetomidine (KD group) or midazolam...

Wark, J. D., Wierzal, N. K., Cronin, K. A. 2020. Mapping shade availability and use in zoo environments: A tool for evaluating thermal comfort. Animals 10(7), 1189.

For many species in zoos, particularly megafauna vulnerable to heat stress, shade is a key environmental resource. However, shade availability has received comparatively less attention than other aspects of the zoo environment. In this study...

Eshar, D., Beaufrère, H. 2020. Anesthetic effects of alfaxalone–ketamine, alfaxalone–ketamine–dexmedetomidine, and alfaxalone–butorphanol–midazolam administered intramuscularly in five striped palm squirrels (Funambulus pennantii). JAALAS 59(4), 384-392.

Injectable anesthesia protocols for five striped palm squirrels (Funambulus pennantii) are poorly described in the literature. In this study, male intact squirrels received intramuscular injections of either alfaxalone (6 mg/kg) and ketamine (40 mg/ kg...

Ambar, N., Eshar, D., Shrader, T. C. et al. 2020. Anesthetic effects of intramuscular alfaxalone–ketamine in naked mole rats (Heterocephalus glaber). JAALAS 59(5), 539-545.

In this study, adult intact male and female (n = 10) naked mole rats (Heterocephalus glaber) were anesthetized by using a combination of ketamine (20 mg/kg IM), and alfaxalone (4.0 mg/kg IM). Induction and recovery...

Eyer, A. E., Miller, L. J. 2020. Evaluating the influence of conspecifics on a male giant anteater’s (Myrmecophaga tridactyla) pacing behavior. Animal Behavior and Cognition 7(4), 556–566.

Stereotypic behavior has been studied in various species, but little information exists on stereotypies in giant anteaters (Myrmecophaga tridactyla) under professional care. Giant anteaters are known for their solitary nature and well-developed sense of smell...

Butler, J. L., Kennerley, S. W. 2019. Mymou: A low-cost, wireless touchscreen system for automated training of nonhuman primates. Behaviour Research Methods 51, 2559–2572.

Training nonhuman primates (NHPs) to perform cognitive tasks is essential for many neuroscientific investigations, yet laboratory training is a time-consuming process with inherent limitations. Habituating NHPs to the laboratory staff and experimental equipment can take...

Parrott, M. L., Nation, A., Selwood, L. 2019. Female mate choice significantly increases captive breeding success, and scents can be frozen to determine choice, in the stripe-faced dunnart. Applied Animal Behaviour Science 214, 95-101.

Devising non-invasive techniques to maintain natural behaviours and increase breeding success of captive populations is a high priority in the conservation of endangered species. Allowing animals to choose their own mates not only preserves behaviours...

Howell, C. P., Cheyne, S. M. 2019. Complexities of using wild versus captive activity budget comparisons for assessing captive primate welfare. Journal of Applied Animal Welfare Science 22(1), 78-96.

Activity budget comparisons between groups or individuals in the wild and those in captivity are commonly used to determine the range of wild-type behaviors that nonhuman animals in captivity perform. These comparisons are conducted with...

Catapani, M. L., Pires, J. S. R., da Silva Vasconcellos, A. 2019. Single- or pair-housed: Which is better for captive southern tamanduas? Journal of Applied Animal Welfare Science 22(3), 289-297.

The captive environment can limit some important behavioral options for nonhuman animals, which often results in decreased welfare. The companion of a conspecific can be a source of complexity in captivity, but this aspect has...

Hopper, L. M., Fernandez‐Duque, E., Williams, L. E. 2019. Testing the weekend effect hypothesis: Time of day and lunar phase better predict the timing of births in laboratory‐housed primates than day of week. American Journal of Primatology 81(7), e23026.

The weekend effect hypothesis proposes that captive primates are more likely to give birth during times of low disturbance and reduced staff activity. The hypothesis specifically predicts that laboratory‐housed primates will be more likely to...

Riggio, G., Mariti, C., Boncompagni, C. et al. 2019. Feeding enrichment in a captive pack of European wolves (Canis lupus lupus): Assessing the effects on welfare and on a zoo's recreational, educational and conservational role. Animals 9(6), 331.

This study investigated the effects of two feeding enrichment programs on the behaviour of a captive pack of European wolves (Canis lupus lupus) and their correlation with both zoo visitors' interest towards the exhibit and...

Sherwen, S. L., Hemsworth, P. H. The visitor effect on zoo animals: Implications and opportunities for zoo animal welfare. Animals 9(6), 366.

Achieving and maintaining high standards of animal welfare is critical to the success of a modern zoo. Research has shown that an animal's welfare is highly dependent on how various individual animal factors (e.g., species...

Axiak Flammer, S., Eskes, C., Kohler, I. et al. 2019. Alternatives to carbon dioxide—Taking responsibility for humanely ending the life of animals. Animals 9(8), 482.

Carbon dioxide (CO2) is commonly used to kill rodents. However, a large body of research has now established that CO2 is aversive to them. A multidisciplinary symposium organized by the Swiss Federal Food Safety and...

Jakob-Hoff, R., Kingan, M., Fenemore, C. et al. 2019. Potential impact of construction noise on selected zoo animals. Animals 9(8), 504.

In anticipation of a major construction project in an urban New Zealand zoo, a study was initiated to assess the response to construction noise of selected animal species (elephant, giraffe, emu and alligator) previously observed...

Adams, R., Stanley, C. E., Piana, E. et al. 2019. Physiological and behavioral indicators to measure crustacean welfare. Animals 9(11), 914.

The purpose of this project was to determine how neural circuits were affected during warming by examining sensory neurons, the neuromuscular junction, and the cardiac function and behavior of the commercially important crustacean species, the...

Estrada, C., Cuenca, L., Cano-Fernandez, L. et al. 2019. Voluntary exercise reduces plasma cortisol levels and improves transitory memory impairment in young and aged Octodon degus. Behavioural Brain Research 373, 112066.

Sleep deprivation (SD) has been reported to induce transient cognitive impairment in functional domains commonly affected in dementia, including memory. Indeed, sleep disturbance has been proposed as an early marker for Alzheimer’s disease (AD). SD...

Fernandez, E. J., Timberlake, W. 2019. Foraging devices as enrichment in captive walruses (Odobenus rosmarus). Behavioural Processes 168, 103943.

Stereotypies in captive animals are typically defined as repetitive, invariant behavioral patterns with no obvious goal or function. They are often attributed to boredom or fear and treated by introducing occupational stimuli. The present work...

Browning, G. R., Eshar, D., Beaufrere, H. 2019. Comparison of dexmedetomidine-ketamine-midazolam and isoflurane for anesthesia of black-tailed prairie dogs (Cynomys ludovicianus). JAALAS 58(1), 50-57.

Few studies evaluate anesthesia in black-tailed prairie dogs (Cynomys ludovicianus). Isoflurane inhalant anesthesia is used in this species most commonly, but injectable protocols are poorly described. Here we compared the physiologic effects, including anesthetic depth...

Darbyshire, A. K., Oliver, K. H., Dupont, W. D. et al. 2019. Anesthesia and euthanasia of brine shrimp (Artemia franciscana). JAALAS 58(1), 58-63.

Invertebrates are often overlooked as laboratory animals, yet they are commonly used in toxicology, developmental, cellular and molecular biology, and radiation studies with euthanasia as an endpoint. Little is known regarding appropriate euthanasia methods for...

Association of Primate Veterinarians. 2019. Association of Primate Veterinarians’ guidelines for nonhuman primate restraint. JAALAS 58(3), 282-284.

The Association of Primate Veterinarians (APV) recognizes that several forms of restraint, including physical and chemical, are necessary for the safe handling of nonhuman primates (NHPs). The following guidelines aim to provide information to researchers...

McIntosh, M. K., Armitage-Brown, B., Levy, R. 2019. Refinements of equipment and methodology to reduce risk during pole-guided chair transfer of nonhuman primates. JAALAS 58(4), 462-468.

Neurophysiologic studies of NHP commonly involve their transfer from a housing enclosure to a laboratory by using a mobile chair. This transfer should be performed in a manner that is safe and minimizes stress for...

Association of Primate Veterinarians. 2019. Association of Primate Veterinarians’ Position Statement: Cerebrospinal fluid aspiration for nonhuman primates in biomedical research. JAALAS 58(4), 428-429.

The Association of Primate Veterinarians (APV) recognizes that CSF collection may be required for both clinical and research purposes in nonhuman primates (NHP). Because there are inherent risks associated with the technique, the laboratory animal...

Animal Welfare Institute. 2019. Let’s get serious about animal play. AWI Quarterly 68(3) Fall, 19.

This article describes the importance of providing laboratory animals with opportunities to engage in play, and provides a few practical ideas for how to do this.

Balansard, I., Cleverley, L., Cutler, K. L. et al. 2019. Revised recommendations for health monitoring of non-human primate colonies (2018): FELASA Working Group Report. Laboratory Animals 53(5), 429–446.

The genetic and biological similarity between non-human primates and humans has ensured the continued use of primates in biomedical research where other species cannot be used. Health-monitoring programmes for non-human primates provide an approach to...