Refinement Database

Database on Refinement of Housing, Husbandry, Care, and Use of Animals in Research

This database, created in 2000, is updated every four months with newly published scientific articles, books, and other publications related to improving or safeguarding the welfare of animals used in research.

Tips for using the database:

  • This landing page displays all of the publications in the database.
  • Use the drop-down menus to filter these publications by Animal Type, Setting, and/or Topic.
  • Clicking on a parent category (e.g., Rodent) will include publications relating to all the items in that category (e.g., Chinchilla, Gerbil, Guinea Pig, etc.).
  • You may also add a keyword to further narrow your search.
  • Please note that at this time, only publications dated 2010 or later (with some exceptions) can be filtered by Animal Type and Topic, and only publications dated 2020 or later (with some exceptions) can be filtered by Setting. Most publications older than 2010 can only be searched by keyword. 
Monreal-Pawlowsky, T., Vaicekauskaitė , R., Palencia Membrive, G. et al. 2021. Goal-oriented behavioural and environmental enrichment in aquarium species. Journal of Zoo and Aquarium Research, 9(4), 273-280.

Environmental enrichment is a common tool used in zoo and aquarium settings to provide mental and physical stimulation to animals under human care. This paper aims to present a primary approach to goal-oriented environmental and...

Kanghae, H., Thongprajukaew, K., Inphrom, S. et al. 2021. Enrichment devices for green turtles (Chelonia mydas) reared in captivity programs. Zoo Biology 40(5), 407-416.

Environmental enrichment supports the well-being and welfare of captive animals. In the current study, the most suitable form of enrichment device for captive green turtles (Chelonia mydas) was investigated, to support head-start programs rearing turtles...

Hewitt, L., Small, A. 2021. Welfare of farmed crocodilians: Identification of potential animal-based measures using elicitation of expert opinion. Animals 11(12), 3450.

Animal-based measures are the measure of choice in animal welfare assessment protocols as they can often be applied completely independently to the housing or production system employed. Although there has been a small body of...

Asada, K., Nakajima, R., Nishibayashi, T. et al. 2021. Improving keeping for octopuses by testing different escape-proof designs on tanks for “big blue octopus” (Octopus cyanea). Applied Sciences 11(18), 8547.

Octopus cyanea has a wide range of natural distribution and is interesting for scientific research. However, unlike Octopus vulgaris, the species is poorly studied, and few data exist on best practices for keeping them. One...

Riley, A., Terry, M., Freeman, H. et al. 2021. Evaluating the effect of visitor presence on Nile crocodile (Crocodylus niloticus) behavior. Journal of Zoological and Botanical Gardens 2(1), 115–129.

Visitor presence has been shown to affect the behavior of animals in zoos. However, studies to date have not included a wide range of taxonomic groupings, and thus, the effect is poorly understood for many...

Waterman, J. O., McNally, R., Harrold, D. et al. 2021. Evaluating environmental enrichment methods in three zoo-housed varanidae lizard species. Journal of Zoological and Botanical Gardens 2(4), 716–727.

Environmental enrichment has been shown to enhance the behavioural repertoire and reduce the occurrence of abnormal behaviours, particularly in zoo-housed mammals. However, evidence of its effectiveness in reptiles is lacking. Previously, it was believed that...

Melfi, V. A., Dorey, N. R., Ward, S. (Eds.) 2020. Zoo Animal Learning and Training. John Wiley & Sons: Hoboken, NJ, 384 pp.

Comprehensively explains animal learning theories and current best practices in animal training within zoos. This accessible, up-to-date book on animal training in a zoo/aquaria context provides a unified approach to zoo animal learning, bringing together...

Paredes, E., Costas, D. 2020. Non-lethal sex identification of sea urchins: Method and advantages. Lab Animal 49(1), 7–8.

A simple method for sex determination can reduce the number of sea urchins used in the lab and help to optimize experimental design. Our new methodology developed with Paracentrotus lividus is simple and inexpensive, requiring...

Anderson, J., Kaplan-Stein, S., Adolph, S. et al. 2020. Assessment of non-contact infrared thermometer measurement sites in birds. Journal of Applied Animal Welfare Science 23(2), 131-139.

The standard method of obtaining body temperature in a bird can be a stressful event, making routine evaluations challenging. Twenty-eight privately owned birds in good health were enrolled in the study to compare digital and...

Reese, L., Ladwig-Wiegard, M., von Fersen, L. et al. 2020. Deflighting zoo birds and its welfare considerations. Animal Welfare 29(1), 69-80.

For over a century, the practice of deflighting has taken place in zoological collections in order to ensure birds remain in open-topped enclosures. Over time, efforts have been made to improve or develop new (surgical)...

Kawamura, G., Yong, A. S. K., Roy, D. C. et al. 2020. Shelter colour preference in the purple mud crab Scylla tranquebarica (Fabricius). Applied Animal Behaviour Science 225, 104966.

Cannibalism a serious problem in the grow-out of mud crabs in ponds. Studies have proven that presence of shelters decreases aggressive behaviour of Scylla spp. in ponds and tanks. In this study, the shelter colour...

Harvey, A., Beausoleil, N., Ramp, D. et al. 2020. A ten-stage protocol for assessing the welfare of individual non-captive wild animals: Free-roaming horses (Equus ferus caballus) as an example. Animals 10(1), 148.

Knowledge of the welfare status of wild animals is vital for informing debates about the ways in which we interact with wild animals and their habitats. Currently, there is no published information about how to...

Yaw, T. J., Mans, C., Johnson,S. et al. 2020. Evaluation of subcutaneous administration of alfaxalone-midazolam and dexmedetomidine-midazolam for sedation of ball pythons (Python regius). Journal of the American Veterinary Medical Association 256(5), 573-579.

OBJECTIVE: To evaluate SC administration of alfaxalone-midazolam and dexmedetomidine-midazolam for sedation of ball pythons (Python regius). ANIMALS: 12 healthy juvenile ball pythons. PROCEDURES: In a randomized crossover study, each snake was administered a combination of...

Boers, K. L., Allender, M. C., Novak, L. J. et al. 2020. Assessment of hematologic and corticosterone response in free-living eastern box turtles (Terrapene carolina carolina) at capture and after handling. Zoo Biology 39(1), 13-22.

Hematology is a common tool for wildlife health assessments. Manual leukocyte counts are required in reptiles, however, disagreement between quantification methods has been observed in some chelonians. This study determined agreement between two methods of...

Zemanova, M. A. 2020. Towards more compassionate wildlife research through the 3Rs principles: Moving from invasive to noninvasive methods. Wildlife Biology 2020(1), no page numbers.

Research in ecology and wildlife biology remains crucial for increasing our knowledge and improving species management and conservation in the midst of the current biodiversity crisis. However, obtaining information on population status often involves invasive...

Petrović, T. G., Vučić, T. Z., Nikolić, S. Z. et al. 2020. The effect of shelter on oxidative stress and aggressive behavior in crested newt larvae (Triturus spp.). Animals 10(4), 603.

Shelters are important for animal survival. Provision of adequate hiding places allow animals to express their natural sheltering behavior and it can have different positive effects on cortisol levels, physiological processes and mental performance. Although...

House, G. M., Sobotik, E. B., Nelson, J. R. et al. 2020. Effects of ultraviolet light supplementation on Pekin duck production, behavior, and welfare. Animals 10(5), 833.

Ducks, like other domestic poultry species, can visualize the ultraviolet (UV) portion of the light spectrum; however, the importance of UV light radiation in artificially lit duck growout facilities remains unknown. The objective of this...

Skinner, M., Miller, N. 2020. Aggregation and social interaction in garter snakes (Thamnophis sirtalis sirtalis). Behavioral Ecology and Sociobiology 74, 51.

Previous research has shown that competition, familiarity, diet, and relatedness can all influence aggregation patterns in garter snakes. We controlled for these factors and examined social aggregation patterns in juvenile Eastern garter snakes (Thamnophis sirtalis...

Rasys, A. M., Divers, S. J., Lauderdale, J. D. et al. 2020. A systematic study of injectable anesthetic agents in the brown anole lizard (Anolis sagrei). Laboratory Animals 54(3), 281–292.

Anolis lizards have served as important research models in fields ranging from evolution and ecology to physiology and biomechanics. However, anoles are also emerging as important models for studies of embryo development and tissue regeneration...

Kneeland, M. R., Spagnuolo, V. A., Evers, D. C. et al. 2020. A novel method for captive rearing and translocation of juvenile common loons. Zoo Biology 39(4), 263–270.

Common loons (Gavia immer) are diving waterbirds that are particularly challenging to keep in captivity due to their specific behavioral and physiologic needs, special housing requirements, and susceptibility to stress‐related disease. We report a novel...

Elwood, R. W. 2020. Do arthropods respond to noxious stimuli purely by reflex? Animal Sentience 29(10).

Mikhalevich & Powell (2020) argue that it is wrong to dismiss the idea of sentience in invertebrates. Here, I expand on the evidence for crustaceans responding to noxious stimuli in ways that are not explained...

Hosking, A., Martinic, G. 2020. The care of the Children’s Python (Antaresia childreni). Animal Technology and Welfare 19(2), 118-122.

This article describes the care of the Children’s python (Antaresia childreni). It includes information on housing, feeding, handling, as well as the general health care of these animals. The information presented is derived from Standard...

Hosking, A., Martinic, G. 2020. The care of Central and Pygmy bearded dragons. Animal Technology and Welfare 19(2), 125-130.

This article describes the care of central bearded dragons (Pogona vitticeps) as well as Pygmy bearded dragons (Pogona henrylawsoni). It includes information on housing, feeding, handling and sexing technique, as well as the general health...

Michaels, C. J., Gini, B. F., Clifforde, L. 2020. A persistent abnormal repetitive behaviour in a false water cobra (Hydrodynastes gigas). Animal Welfare 29(4), 371-378.

Stereotypies (a subset of Abnormal Repetitive Behaviour [ARB]) are characterised by an unchanging pattern of behaviour and in captive animals can be associated with poor welfare. Although well known in certain taxa, little is known...

Llaniguez, J. T., Szczepaniak, M. A., Rickman, B. H. et al. 2020. Quantitative and qualitative behavioral measurements to assess pain in axolotls (Ambystoma mexicanum). JAALAS 59(2), 186–196.

Effective pain relief in animals relies on the ability to discern pain and assess its severity. However, few objective measures exist to assess the presence and severity of pain in axolotls, and few resources are...