Refinement Database

Database on Refinement of Housing, Husbandry, Care, and Use of Animals in Research

This database, created in 2000, is updated every four months with newly published scientific articles, books, and other publications related to improving or safeguarding the welfare of animals used in research.

Tips for using the database:

  • This landing page displays all of the publications in the database.
  • Use the drop-down menus to filter these publications by Animal Type, Setting, and/or Topic.
  • Clicking on a parent category (e.g., Rodent) will include publications relating to all the items in that category (e.g., Chinchilla, Gerbil, Guinea Pig, etc.).
  • You may also add a keyword to further narrow your search.
  • Please note that at this time, only publications dated 2010 or later (with some exceptions) can be filtered by Animal Type and Topic, and only publications dated 2020 or later (with some exceptions) can be filtered by Setting. Most publications older than 2010 can only be searched by keyword. 
Mather, J. A., Carere, C. 2019. Consider the individual: Personality and welfare in invertebrates. In: The Welfare of Invertebrate Animals. Carere, C., Mather, J. (eds), 229-245. Springer, Cham.

Personality, defined as consistent between-individual variation in clusters of behavioral traits independent of factors such as age or sex, emerges in most animal species tested so far. The number of invertebrate species discovered to have...

Cooke, G. M., Tonkins, B. M., Mather, J. A. 2019. Care and enrichment for captive cephalopods. In: The Welfare of Invertebrate Animals. Carere, C., Mather, J. (eds), 179-208. Springer, Cham.

Cephalopods have become an archetype for invertebrate cognition, sentience and welfare studies. Their convergence with so-called ‘higher’ vertebrates (birds, mammals) in memory, learning, problem-solving, tool use and likely sentience has made biologists completely rethink the...

Costa, R., Sousa, C., Llorente, M. 2018. Assessment of environmental enrichment for different primate species under low budget: A case study. Journal of Applied Animal Welfare Science 21(2), 185-199.

The 2011 European Union Zoo Inquiry presented evidence that most zoos fail to achieve adequate levels of nonhuman animal welfare. Appropriate environmental enrichment (EE) can play a role in the promotion of welfare. However, financial...

Chotard, H., Ioannou, S., Davila-Ross, M. 2018. Infrared thermal imaging: Positive and negative emotions modify the skin temperatures of monkey and ape faces. American Journal of Primatology 80(5), e22863.

Facial thermography has enabled researchers to noninvasively and continuously measure the changes of a range of emotional states in humans. The present work used this novel technology to study the effect of positive and negative...

Shapiro, M. E., Shapiro, H. G., Ehmke, E. E. 2018. Behavioral responses of three lemur species to different food enrichment devices. Zoo Biology 37(3), 146–155.

Environmental enrichment is a tool used to promote the welfare and well‐being of captive animals by encouraging the display of species‐specific behaviors and reducing the stress or boredom induced by captive environments. Lemurs are highly...

Baker, B., Taylor, S., Montrose, V. T. 2018. The effects of olfactory stimulation on the behavior of captive ring-tailed lemurs (Lemur catta). Zoo Biology 37(1), 16–22.

Ring‐tailed lemurs reside in many animal collections worldwide. Lemur welfare may be a cause of concern due to some captive individuals exhibiting stereotypic behavior. Despite these concerns, there has been little exploration of methods of...

Coke, C., Skoumbourdis, E., Rodgers, J. C. et al. 2018. Blunting/cutting canines of adult male monkeys: A discussion by the Laboratory Animal Refinement & Enrichment Forum. Animal Technology & Welfare 17(2), 105-107.

"When you keep adult Rhesus macaque (Macaca mulatta) males, adult Cynomolgus (Macaca fascicularis) males or adult Vervet males (Chlorocebus pygerythrus), in the same enclosure, is it advisable to have the canines of the males blunted...

Lutz, C. K. 2018. A cross-species comparison of abnormal behavior in three species of singly-housed old world monkeys. Applied Animal Behaviour Science 199, 52-58.

Abnormal behavior occurs in a number of captive nonhuman primate species and is often used as an indicator of welfare. However, reported levels of abnormal behavior often vary across species, making general welfare judgments difficult...

Mellor, E., Brilot, B., Collins, S. 2018. Abnormal repetitive behaviours in captive birds: a Tinbergian review. Applied Animal Behaviour Science. 198, 109-120.

Abnormal repetitive behaviours (ARBs) are associated with past, or present, welfare problems and are common elements of the behavioural repertoire of some captive animals, including birds. Millions of birds from hundreds of species are held...

Perdue, B. M., Beran, M. J., Washburn, D. A. 2018. A computerized testing system for primates: Cognition, welfare, and the Rumbaughx. Behavioural Processes 156, 37-50.

Innovations in apparatus technology come about for a variety of reasons such as the need to use the same methodology with various species, the opportunity to present dynamic and carefully controlled stimuli, the goal of...

O’Rourke, D. P., Baccanale, C. L., Stoskopf, M. K. 2018. Nontraditional laboratory animal species (cephalopods, fish, amphibians, reptiles, and birds). ILAR Journal 59(2), 168-176.

Aquatic vertebrates and cephalopods, amphibians, reptiles, and birds offer unique safety and occupational health challenges for laboratory animal personnel. This paper discusses environmental, handling, and zoonotic concerns associated with these species.

Heyworth, C., Olivo, D. 2018. Environmental and psychological enrichment for NHPs reimagined and repurposed. Laboratory Animal Science Professional 5(4) (December), 39-43.

This article describes creative enrichment ideas for nonhuman primates, including celery stalks embedded with seeds; paper rolled into tubes, braided and filled with fruit and seeds; pineapple crowns loaded with treats; dry spaghetti noodles coated...

Unakafov, A. M., Möller, S., Kagan, I. et al. 2018. Using imaging photoplethysmography for heart rate estimation in non-human primates. PLOS ONE 13(8), e0202581.

For humans and for non-human primates heart rate is a reliable indicator of an individual’s current physiological state, with applications ranging from health checks to experimental studies of cognitive and emotional state. In humans, changes...

Pasmans, F., Bogaerts, S., Braeckman, J. et al. 2017. Future of keeping pet reptiles and amphibians: Towards integrating animal welfare, human health and environmental sustainability. Veterinary Record 181(17), 450.

The keeping of exotic pets is currently under debate and governments of several countries are increasingly exploring the regulation, or even the banning, of exotic pet keeping. Major concerns are issues of public health and...

Chatigny, F., Kamunde, C., Creighton, C. M. et al. 2017. Uses and doses of local anesthetics in fish, amphibians, and reptiles. JAALAS 56(3), 244-253.

Local anesthetics are an integral part of routine pain management in mammals, yet their use is relatively limited in fish, amphibians and reptiles. These animals frequently undergo potentially painful surgical procedures and therefore could possibly...

Martin, A. L. 2017. Theprimatologist as a behavioral engineer. American Journal of Primatology 79, e22500.

The field of primate behavior management has had only limited success in preventing and treating abnormal behaviors, such as stereotypy and self‐injury, in captive non‐human primates (NHP). In contrast, applied behavior analysts have had great...

Palmer, S. 2017. Rescue-Enrich-Release: The environmental enrichment program for three species of captive primates at Colobus. Canopy 17(2), 27-30.

It is widely known that the psychological wellbeing of captive animals can become compromised by a captive environment that lacks proper environmental stimulation. Environmental enrichment programs have become the norm in captive environments yet research...

Carlson, A., Allen, C., Skoumbourdis, E. et al. 2017. Cooked food for non-human primates: A discussion by the Laboratory Animal Refinement & Enrichment Forum. Animal Technology and Welfare 16(2), 124-126.

"Do any of you give cooked food like pasta, potatoes or vegetables to non-human primates? What’s your experience? Do the animals benefit from cooked food; do they like it; does it affect their health in...

Billingham, E. 2017. The curious tale of axolotl enrichment. Animal Technology and Welfare 16(3), 191-194.

Axolotls can be used in scientific research to provide fertilised embryos for investigations into the genetic pathways controlling stem cell development. Breeding animals are housed for several years and environmental enrichment is required to improve...

Ludwig, S. C., Kapetanopoulos, K., Kotrschal, K. et al. 2017. Effects of mate separation in female and social isolation in male free-living Greylag geese on behavioural and physiological measures. Behavioural Processes 138, 134-141.

The presence of a social partner may significantly contribute to coping with stressful events, whereas dyadic separation generally increases glucocorticoid levels and, thereby, might also affect immune function and health. To study the covariation between...

Coleman, K., Novak, M. A. 2017. Environmental enrichment in the 21st century. ILAR Journal 58(2), 295-307.

More than a quarter of a century has elapsed since the Animal Welfare Act mandated that research facilities develop and follow a plan to promote the psychological well-being of captive primates. Since passage of this...

Yin, L., Yang, H., Xu, L. et al. 2017. Feather performance, walking ability, and behavioral changes of geese in response to different stocking densities. Applied Animal Behaviour Science 196, 108-112.

In recent decades, goose production has become more specialized and widespread, and rearing geese in plastic wire-floor pens is common in China. This type of rearing pattern is more productive than other rearing patterns since...

McMillan, J. L., Bloomsmith, M. A., Prescott, M. J. 2017. An international survey of approaches to chair restraint of nonhuman primates. Comparative Medicine 67(5), 442–451.

Specifically designed restraint chairs are the preferred method of restraint for research studies that require NHP to sit in place for sustained periods of time. In light of increasing emphasis on refinement of restraint to...

Lopes, V. M., Sampaio, E., Roumbedakis, K. et al. 2017. Cephalopod biology and care, a COST FA1301 (CephsInAction) training school: Anaesthesia and scientific procedures. Invertebrate Neuroscience 17, 8.

Cephalopods are the sole invertebrates included in the list of regulated species following the Directive 2010/63/EU. According to the Directive, achieving competence through adequate training is a requisite for people having a role in the...

Cooke, G. M. 2017. Stereotypic behavior is not limited to terrestrial taxa: A response to Rose et al. Journal of Veterinary Behavior 22, 17-18.

This comment is in response to a recent review of stereotypical behavior in captive exotic animals (Rose et al., 2017). Negative stereotypical behavior occurs across most if not all taxa, including notable aquatic invertebrates. A...