Refinement Database

Database on Refinement of Housing, Husbandry, Care, and Use of Animals in Research

This database, created in 2000, is updated every four months with newly published scientific articles, books, and other publications related to improving or safeguarding the welfare of animals used in research.

Tips for using the database:

  • This landing page displays all of the publications in the database.
  • Use the drop-down menus to filter these publications by Animal Type, Setting, and/or Topic.
  • Clicking on a parent category (e.g., Rodent) will include publications relating to all the items in that category (e.g., Chinchilla, Gerbil, Guinea Pig, etc.).
  • You may also add a keyword to further narrow your search.
  • Please note that at this time, only publications dated 2010 or later (with some exceptions) can be filtered by Animal Type and Topic, and only publications dated 2020 or later (with some exceptions) can be filtered by Setting. Most publications older than 2010 can only be searched by keyword. 
Winnicker, C., Gaskill, B., Garner, J. P. et al. 2016. A Guide to the Behavior & Enrichment of Laboratory Rodents. Charles River Laboratories.

Covering species-typical behavior as well as abnormal/malfunctional behavior and stereotypes observed in mice, rats, hamsters and gerbils, this is an excellent resource for those looking to implement or enhance an existing behavioral husbandry and enrichment...

Tonkins, B. M., Tyers, A. M., Cook G. M. 2015. Cuttlefish in captivity: An investigation into housing and husbandry for improving welfare. Applied Animal Behaviour Science 168, 77-83.

The European cuttlefish (Sepia officinalis) is often kept in public aquaria, is becoming more common in aquaculture, and is also the most frequently used cephalopod in European research. Since 1st January 2013, all cephalopods (Mollusca)...

Pritchett-Corning, K. R., Gaskill, B. N. 2015. Lack of negative effects on Syrian hamsters and Mongolian gerbils housed in the same secondary enclosure. JAALAS 54(3), 261-266.

In cases where different species might be housed in the same room or secondary enclosure, the Guide for the Care and Use of Laboratory Animals recommends that the animals should be behaviorally compatible and have...

Collymore, C., Tolwani, R. J., Rasmussen, S. 2015. The behavioral effects of single housing and environmental enrichment on adult zebrafish (Danio rerio). JAALAS. 54(3), 280-285.

Environmental enrichment provides laboratory-housed species the opportunity to express natural behavior and exert control over their home environment, thereby minimizing stress. We sought to determine whether providing an artificial plant in the holding tank as...

Keck, V. A., Edgerton, D. S., Hajizadeh, S. et al. 2015. Effects of habitat complexity on pair-housed zebrafish. JAALAS 54(4), 378-383.

Sexually mature zebrafish were housed as single male-female pairs with or without plastic vegetation for 1, 5, or 10 d for comparison of whole-body cortisol measured by radioimmunoassay. Individually housed male zebrafish were used as...

Shams, S., Chatterjee, D., Gerlai, R. 2015. Chronic social isolation affects thigmotaxis and whole-brain serotonin levels in adult zebrafish. Behavioral Brain Research 292, 283-87.

The popularity of the zebrafish has been growing in behavioral brain research. Previously utilized mainly in developmental biology and genetics, the zebrafish has turned out to possess a complex behavioral repertoire. For example, it is...

Bayne, K. A., Beaver, B. V., Mench, J. A. et al. 2015. Laboratory animal behavior. In: Laboratory Animal Medicine, 3rd edition. Fox, J. G., Anderson, L., Otto, G., et al. (eds). Elsevier, Inc., Amsterdam, NL. pp. 1617-1651.

The study of laboratory animal behavior has increased steadily over the last decade, with expanding emphasis on a variety of commonly used species. In the United States, this trend was initially focused on species for...

Manuel, R., Gorissen, M., Stokkermans, M. et al. 2015. The effects of environmental enrichment and age-related differences on inhibitory avoidance in Zebrafish (Danio rerio). Zebrafish 12(2), 152-165.

The inhibitory avoidance paradigm allows the study of mechanisms underlying learning and memory formation in zebrafish (Danio rerio Hamilton). For zebrafish, the physiology and behavior associated with this paradigm are as yet poorly understood. We...

Brown, C. 2015. Fish intelligence, sentience and ethics. Animal Cognition 18(1), 1-17.

Fish are one of the most highly utilised vertebrate taxa by humans; they are harvested from wild stocks as part of global fishing industries, grown under intensive aquaculture conditions, are the most common pet and...

Cooke, G. M., Tonkins, B. M. 2015. Behavioural indicators of welfare exhibited by the common European cuttlefish (Sepia officinalis). Journal of Zoo and Aquarium Research 3(4), 157-162.

The common European cuttlefish (Sepia officinalis) is frequently found in public aquaria in Europe. These remarkable creatures make fantastic display animals due to their rapid colour/texture/behaviour changes associated with feeding or camouflage. They possess extremely...

Bethell, E. J., Koyama, N. F. 2015. Happy hamsters? Enrichment induces positive judgement bias for mildly (but not truly) ambiguous cues to reward and punishment in Mesocricetus auratus. Royal Society Open Science 2, 140399.

Recent developments in the study of animal cognition and emotion have resulted in the ‘judgement bias’ model of animal welfare. Judgement biases describe the way in which changes in affective state are characterized by changes...

Brown, C. 2015. Fish intelligence, sentience and ethics. Animal Cognition 18(1), 1–17.

Fish are one of the most highly utilised vertebrate taxa by humans; they are harvested from wild stocks as part of global fishing industries, grown under intensive aquaculture conditions, are the most common pet and...

Sneddon, L. U., Elwood, R. W., Adamo, S. A. et al. 2014. Defining and assessing animal pain. Animal Behaviour 97, 201-212.

The detection and assessment of pain in animals is crucial to improving their welfare in a variety of contexts in which humans are ethically or legally bound to do so. Thus clear standards to judge...

Bode, A. E., Barber, H. 2014. Use of vinyl nonadhesive tape as an alternative for positioning rodents in small animal imaging. American Association for Laboratory Animal Science [AALAS] Meeting Official Program, 597-598. (Abstract #P185).

Specific positioning for different imaging modalities is essential in our small animal imaging core. While we have different animal holders designed to position the animal inside the MRI, additional securing of the animal to the...

Burlingame, L. A., Na, J., Dunbar, M. et al. 2014. Behavioral ethogram as a health assessment tool in a feline vaccine study. American Association for Laboratory Animal Science [AALAS] Meeting Official Program, 610. (Abstract #P227).

For infectious disease studies, assessment of feline health is traditionally limited to metrics such as body temperature (BT), change in body weight (BW), and clinical signs (CS). Recently, behavioral ethograms designed for assessment of rabbits...

Qi, K., De-mi, S., Chuan, Q. 2014. Current understanding and use of environmental enrichment in China. Enrichment Record 20, 8-11.

In practice, consideration is given to providing most of the species used in research,testing and education withsome level of environmental enrichment. However, although the current level of awareness and understanding about the benefits of environmental...

Schroeder, P., Jones, S., Young, I. S. et al. 2014. What do zebrafish want? Impact of social grouping, dominance and gender on preference for enrichment. Laboratory Animals 48(4), 328-337.

Although environmental enrichment is known to improve laboratory rodent wellbeing and enhance scientific data collection, relatively little is known with regards to the type of enrichment that might be useful for zebrafish (Danio rerio). Therefore...

Collymore, C., Lawrence, C., Lieggi, C. 2014. Enrichment for laboratory zebrafish (Danio rerio). Laboratory Animal Science Professional 2(3) (September), 51-54.

This article discusses how behavioral management, enrichment structures, diet, and light cycle can be used to help improve the welfare of zebrafish.

Hawkins, P. 2014. Refining housing, husbandry and care for animals used in studies involving biotelemetry. Animals 4(2), 361-373.

Biotelemetry can contribute towards reducing animal numbers and suffering in disciplines including physiology, pharmacology and behavioural research. However, the technique can also cause harm to animals, making biotelemetry a ‘refinement that needs refining’. Current welfare...

Reinhardt, V. (ed.) 2013. Compassion Makes a Difference - Discussions by the Laboratory Animal Refinement & Enrichment Forum [LAREF], Volume III. Animal Welfare Institute, Washington, DC.

This is the third volume of discussions that took place on the Laboratory Animal Refinement & Enrichment Forum (LAREF). This forum is dedicated to the exchange of personal experiences of refining the conditions under which...

Hrapkiewicz, K., Colby, L. A., Denison, P. 2013. Clinical Laboratory Animal Medicine: An Introduction (4th Ed). Wiley-Blackwell, Ames, IA.

Clinical Laboratory Animal Medicine: An Introduction, Fourth Edition offers a user-friendly guide to the unique anatomy and physiology, care, common diseases, and treatment of small mammals and nonhuman primates. Carefully designed for ease of use...

Readman, G. D., Owen, S. F., Murrell, J. C. et al. 2013 Do fish perceive anaesthetics as aversive? PLOS ONE. 8(9), e73773.

This study addresses a fundamental question in fish welfare: are the anaesthetics used for fish aversive? Despite years of routine general use of many agents, within both scientific research and aquaculture, there is a paucity...

Wolfensohn, S., Hawkins, P., Lilley, E. et al. 2013. Reducing suffering in experimental autoimmune encephalomyelitis (EAE). Journal of Pharmacological and Toxicological Methods 67(3), 169-176.

This report is based on discussions and submissions from an expert working group consisting of veterinarians, animal care staff and scientists with expert knowledge relevant to the field. It aims to facilitate the implementation of...

Froberg-Fejko, K. M., Lecker, J. L. 2012. Going back to nature: The benefits of wood enrichment. Lab Animal 41(11), 345-347.

Environmental enrichment can be defined as altering the living environment of captive animals in order to provide them with opportunities to express more of their natural behavioral repertoire. The challenge of providing effective enrichment in...

Lawrence C. 2012. Environmental enrichment and the laboratory zebrafish. The Enrichment Record 11, 11-15.

The zebrafish (Danio rerio) is a small tropical minnow that is playing an increasingly big role in the world of scientific research. In the last year alone, researchers working with this diminutive fish from south...