Refinement Database

Database on Refinement of Housing, Husbandry, Care, and Use of Animals in Research

This database, created in 2000, is updated every four months with newly published scientific articles, books, and other publications related to improving or safeguarding the welfare of animals used in research.

Tips for using the database:

  • This landing page displays all of the publications in the database.
  • Use the drop-down menus to filter these publications by Animal Type, Setting, and/or Topic.
  • Clicking on a parent category (e.g., Rodent) will include publications relating to all the items in that category (e.g., Chinchilla, Gerbil, Guinea Pig, etc.).
  • You may also add a keyword to further narrow your search.
  • Please note that at this time, only publications dated 2010 or later (with some exceptions) can be filtered by Animal Type and Topic, and only publications dated 2020 or later (with some exceptions) can be filtered by Setting. Most publications older than 2010 can only be searched by keyword. 
Nordquist, R., van der Staay, F., van Eerdenburg, F. et al. 2017. Mutilating procedures, management practices, and housing conditions that may affect the welfare of farm animals: Implications for welfare research. Animals 7(2), 12.

A number of mutilating procedures, such as dehorning in cattle and goats and beak trimming in laying hens, are common in farm animal husbandry systems in an attempt to prevent or solve problems, such as...

Chatigny, F., Kamunde, C., Creighton, C. M. et al. 2017. Uses and doses of local anesthetics in fish, amphibians, and reptiles. JAALAS 56(3), 244-253.

Local anesthetics are an integral part of routine pain management in mammals, yet their use is relatively limited in fish, amphibians and reptiles. These animals frequently undergo potentially painful surgical procedures and therefore could possibly...

Billingham, E. 2017. The curious tale of axolotl enrichment. Animal Technology and Welfare 16(3), 191-194.

Axolotls can be used in scientific research to provide fertilised embryos for investigations into the genetic pathways controlling stem cell development. Breeding animals are housed for several years and environmental enrichment is required to improve...

Elwood, R. W., Dalton, N., Riddell, G. 2017. Aversive responses by shore crabs to acetic acid but not to capsaicin. Behavioural Processes 140, 1-5.

Nociception is the ability to encode and perceive harmful stimuli and allows for a rapid reflexive withdrawal. In some species, nociception might be accompanied by a pain experience, which is a negative feeling that allows...

Marini, D., Colditz, I. G., Hinch, G. et al. 2017. Self-administration by consumption of flunixin in feed alleviates the pain and inflammation associated with castration and tail docking of lambs. Applied Animal Behaviour Science 188, 26-33.

It can be impractical for farmers to provide pain relief to livestock following husbandryt procedures such as castration and tail-docking, particularly in pasture-based systems because animals need to be repeatedly gathered to handling facilities and...

Serrapica, M., Boivin, X., Coulon, M. et al. 2017. Positive perception of human stroking by lambs: Qualitative behaviour assessment confirms previous interpretation of quantitative data. Applied Animal Behaviour Science 187, 31-37.

Qualitative behaviour assessment (QBA) was used to validate previous published interpretation whether human stroking has beneficial effects on lambs prematurely separated from their mothers. For a period of 8 weeks a familiar human (FH) subjected...

Lopes, V. M., Sampaio, E., Roumbedakis, K. et al. 2017. Cephalopod biology and care, a COST FA1301 (CephsInAction) training school: Anaesthesia and scientific procedures. Invertebrate Neuroscience 17, 8.

Cephalopods are the sole invertebrates included in the list of regulated species following the Directive 2010/63/EU. According to the Directive, achieving competence through adequate training is a requisite for people having a role in the...

Cooke, G. M. 2017. Stereotypic behavior is not limited to terrestrial taxa: A response to Rose et al. Journal of Veterinary Behavior 22, 17-18.

This comment is in response to a recent review of stereotypical behavior in captive exotic animals (Rose et al., 2017). Negative stereotypical behavior occurs across most if not all taxa, including notable aquatic invertebrates. A...

Averós, X., Beltrán de Heredia I., Ruiz, R. et al. 2016. The impact of group size on welfare indicators of ewes during pregnancy. PLOS ONE 11(11), e0167061.

Group size (GS) and space allowance have major implications for the welfare of production species, however their effects are often confounded. In a previous study we investigated the impact of varying space allowance at constant...

Fregin, T., Bickmeyer U. 2016. Electrophysiological investigation of different methods of anesthesia in lobster and crayfish. PLOS ONE 11(9), e0162894.

Objectives: In search for methods of anesthesia of crustaceans, an implanted electrode into lobster and crayfish CNS enabled us to monitor signal propagation in the nerve system of animals undergoing different protocols. Results: Cooling (tap...

Roth, B., Grimsbø, E. 2016. Electrical stunning of edible crabs (Cancer pagurus): from single experiments to commercial practice. Animal Welfare 25(4), 489-497.

To determine the optimal electrical stunning conditions for edible crabs (Cancer pagurus) their impedance was investigated along with currents with the potential to render the animal insensible within 1 s. This information was used to...

Orford, F., Ford, E. A., Brown, S. N. et al. 2016. The evaluation of two commercial electric sheep stunning systems: current applied and the effect on heart function. Animal Welfare 25(3), 331-337.

The maintenance of head-only minimum stunning currents for sheep to ≥ 1.0 Amp as per current legislation was examined in two trials in a commercial abattoir. In the first trial, a Jetco MS100 stunner failed...

Guesgen, M. J., Beausoleil, N. J., Minot, E. O. et al. 2016. Lambs show changes in ear posture when experiencing pain. Animal Welfare 25(2), 171-177.

Ear posture, or the frequency of postural changes, may reflect various emotional states of animals. In adult sheep (Ovis aries), the 'forward' ear posture has been associated with negative experiences whereas the 'plane' posture has...

Rodríguez, P., Dalmau, A., Manteca, X. et al. 2016. Assessment of aversion and unconsciousness during exposure to carbon dioxide at high concentration in lambs. Animal Welfare 25(1), 73-82.

The most widely used stunning method in sheep is electrical. However, in lambs, this method leads to rupture of the blood vessels, provoking ecchymoses. In pigs (Sus scrofa), the use of CO2-stunning systems has increased...

Guesgen, M. J., Beausoleil, N. J., Leach, M. et al. 2016. Coding and quantification of a facial expression for pain in lambs. Behavioural Processes 132, 49-56.

Facial expressions are routinely used to assess pain in humans, particularly those who are non-verbal. Recently, there has been an interest in developing coding systems for facial grimacing in non-human animals, such as rodents, rabbits...

Magee, B., Elwood, R. W. 2016. Trade-offs between predator avoidance and electric shock avoidance in hermit crabs demonstrate a non-reflexive response to noxious stimuli consistent with prediction of pain. Behavioural Processes 130, 31-35.

Arthropods have long been thought to respond to noxious stimuli by reflex reaction. One way of testing if this is true is to provide the animal with a way to avoid the stimulus but to...

Takahashi, K., Nagayama, T. 2016. Shelter preference in the Marmorkrebs (marbled crayfish). Behaviour 153(15), 1913-1930.

For many animals, shelters are valuable source to hide from predators. To know acquisition of adequate shelter is important to understand social interactions of animals. Preferences for types of shelter used by the Marmorkrebs (marbled...

Baines, F. M., Chattell, J., Dale, J. et al. 2016. How much UVB does my reptile need? The UV-Tool, a guide to the selection of UV lighting for reptiles and amphibians in captivity. Journal of Zoo and Aquarium Research 4(1), 42-63.

Guidance is almost non-existent as to suitable levels of UV lighting for reptiles and amphibians, or how to achieve satisfactory UV gradients using artificial lighting. The UV-Tool is a working document that seeks to address...

Barnard, S., Matthews, L., Messori, S. et al. 2016. Laterality as an indicator of emotional stress in ewes and lambs during a separation test. Animal Cognition 19(1), 207–214.

We assessed motor laterality in sheep to explore species-specific brain hemi-field dominance and how this could be affected by genetic or developmental factors. Further, we investigated whether directionality and strength of laterality could be linked...

Tonkins, B. M., Tyers, A. M., Cook G. M. 2015. Cuttlefish in captivity: An investigation into housing and husbandry for improving welfare. Applied Animal Behaviour Science 168, 77-83.

The European cuttlefish (Sepia officinalis) is often kept in public aquaria, is becoming more common in aquaculture, and is also the most frequently used cephalopod in European research. Since 1st January 2013, all cephalopods (Mollusca)...

Barnard, S., Matthews, L. R., Messori, S., et al. 2015. Behavioural reactivity of ewes and lambs during partial and total social isolation. Applied Animal Behaviour Science 163, 89-97.

This work investigated the differences in the reactivity of Sarda (primiparous n = 18, multiparous n = 17) and Dorset (multiparous n = 8) breeds of sheep and their singleton lambs to two challenging test...

Anderson, C., Yngvesson, J., Boissy, A. et al. 2015. Behavioural expression of positive anticipation for food or opportunity to play in lambs. Behavioural Processes 113, 152-158.

Anticipatory behaviours may serve a useful tool in studying positive emotional states in animals. This study aimed to investigate if lambs express anticipatory behaviours for opportunities to play or a food reward and if these...

Bayne, K. A., Beaver, B. V., Mench, J. A. et al. 2015. Laboratory animal behavior. In: Laboratory Animal Medicine, 3rd edition. Fox, J. G., Anderson, L., Otto, G., et al. (eds). Elsevier, Inc., Amsterdam, NL. pp. 1617-1651.

The study of laboratory animal behavior has increased steadily over the last decade, with expanding emphasis on a variety of commonly used species. In the United States, this trend was initially focused on species for...

Cooke, G. M., Tonkins, B. M. 2015. Behavioural indicators of welfare exhibited by the common European cuttlefish (Sepia officinalis). Journal of Zoo and Aquarium Research 3(4), 157-162.

The common European cuttlefish (Sepia officinalis) is frequently found in public aquaria in Europe. These remarkable creatures make fantastic display animals due to their rapid colour/texture/behaviour changes associated with feeding or camouflage. They possess extremely...

Sneddon, L. U., Elwood, R. W., Adamo, S. A. et al. 2014. Defining and assessing animal pain. Animal Behaviour 97, 201-212.

The detection and assessment of pain in animals is crucial to improving their welfare in a variety of contexts in which humans are ethically or legally bound to do so. Thus clear standards to judge...