Refinement Database

Database on Refinement of Housing, Husbandry, Care, and Use of Animals in Research

This database, created in 2000, is updated every four months with newly published scientific articles, books, and other publications related to improving or safeguarding the welfare of animals used in research.

Tips for using the database:

  • This landing page displays all of the publications in the database.
  • Use the drop-down menus to filter these publications by Animal Type, Setting, and/or Topic.
  • Clicking on a parent category (e.g., Rodent) will include publications relating to all the items in that category (e.g., Chinchilla, Gerbil, Guinea Pig, etc.).
  • You may also add a keyword to further narrow your search.
  • Please note that at this time, only publications dated 2010 or later (with some exceptions) can be filtered by Animal Type and Topic, and only publications dated 2020 or later (with some exceptions) can be filtered by Setting. Most publications older than 2010 can only be searched by keyword. 
Ausderau, K. K., Colman, R. J., Kabakov, S. et al. 2023. Evaluating depression- and anxiety-like behaviors in non-human primates. Frontiers in Behavioral Neuroscience 16, 1006065.

Depression and anxiety are some of the most prevalent and debilitating mental health conditions in humans. They can present on their own or as co-morbidities with other disorders. Like humans, non-human primates (NHPs) can develop...

Lutz, C. K., Coleman, K., Hopper, L.M. et al. 2022. Nonhuman primate abnormal behavior: Etiology, assessment, and treatment. American Journal of Primatology 84(6), e23380.

Across captive settings, nonhuman primates may develop an array of abnormal behaviors including stereotypic and self-injurious behavior. Abnormal behavior can indicate a state of poor welfare, since it is often associated with a suboptimal environment...

Sørensen, D., Cloutier, S., Gaskill, B. (Eds.). 2021. Animal-centric Care and Management - Enhancing Refinement in Biomedical Research. CRC Press, Boca Raton, FL.

The concept of the 3Rs (Refinement, Reduction and Replacement) has been used as a framework for improving the welfare of laboratory animals for the last half century. By establishing an animal-centric view on housing and...

Reese, L., Ladwig-Wiegard, M., von Fersen, L. et al. 2020. Deflighting zoo birds and its welfare considerations. Animal Welfare 29(1), 69-80.

For over a century, the practice of deflighting has taken place in zoological collections in order to ensure birds remain in open-topped enclosures. Over time, efforts have been made to improve or develop new (surgical)...

Reinhardt, V. (ed.) 2020. It’s Okay to Cry - Discussions by the Laboratory Animal Refinement & Enrichment Forum [LAREF], Volume V. Animal Welfare Institute, Washington, DC.

This is the 5th volume of selected discussions that took place on the electronic Laboratory Animal Refinement & Enrichment Forum between February 2016 and December 2019. The forum was created in October 2002; it allows...

Colman, R. J., Capuano, 3rd, S., Bakker, J. et al. 2021. Marmosets: Welfare, ethical use, and IACUC/regulatory considerations. ILAR Journal 61(2-3), 167-178.

Use of marmosets in biomedical research has increased dramatically in recent years due, in large part, to their suitability for transgenic applications and utility as models for neuroscience investigations. This increased use includes the establishment...

Baker, S. W., Tucci, E. R., Felt, S. A. et al. 2019. A bird's-eye view of regulatory, animal care, and training considerations regarding avian flight research. Comparative Medicine 69(3), 169–178.

A thorough understanding of how animals fly is a central goal of many scientific disciplines. Birds are a commonly used model organism for flight research. The success of this model requires studying healthy and naturally...

Colby, L. A., Nowland, M. H., Kennedy, L. H. 2019. Clinical Laboratory Animal Medicine: An Introduction (5th ed). Wiley-Blackwell, Ames, IA.

The revised fifth edition of Clinical Laboratory Animal Medicine: An Introduction is an accessible guide to basic information for conducting animal research safely and responsibly. It includes a review of the unique anatomic and physiologic...

Coke, C., Skoumbourdis, E., Rodgers, J. C. et al. 2018. Blunting/cutting canines of adult male monkeys: A discussion by the Laboratory Animal Refinement & Enrichment Forum. Animal Technology & Welfare 17(2), 105-107.

"When you keep adult Rhesus macaque (Macaca mulatta) males, adult Cynomolgus (Macaca fascicularis) males or adult Vervet males (Chlorocebus pygerythrus), in the same enclosure, is it advisable to have the canines of the males blunted...

Lutz, C. K. 2018. A cross-species comparison of abnormal behavior in three species of singly-housed old world monkeys. Applied Animal Behaviour Science 199, 52-58.

Abnormal behavior occurs in a number of captive nonhuman primate species and is often used as an indicator of welfare. However, reported levels of abnormal behavior often vary across species, making general welfare judgments difficult...

Mellor, E., Brilot, B., Collins, S. 2018. Abnormal repetitive behaviours in captive birds: a Tinbergian review. Applied Animal Behaviour Science. 198, 109-120.

Abnormal repetitive behaviours (ARBs) are associated with past, or present, welfare problems and are common elements of the behavioural repertoire of some captive animals, including birds. Millions of birds from hundreds of species are held...

Martin, A. L. 2017. Theprimatologist as a behavioral engineer. American Journal of Primatology 79, e22500.

The field of primate behavior management has had only limited success in preventing and treating abnormal behaviors, such as stereotypy and self‐injury, in captive non‐human primates (NHP). In contrast, applied behavior analysts have had great...

Ludwig, S. C., Kapetanopoulos, K., Kotrschal, K. et al. 2017. Effects of mate separation in female and social isolation in male free-living Greylag geese on behavioural and physiological measures. Behavioural Processes 138, 134-141.

The presence of a social partner may significantly contribute to coping with stressful events, whereas dyadic separation generally increases glucocorticoid levels and, thereby, might also affect immune function and health. To study the covariation between...

Sands, C., Evans, C., Buckmaster, C. A. 2017. The grooming sleeve: Encouraging conspecific-like behavior and strengthening the human-animal bond. Laboratory Animal Science Professional 5(2) (June), 52-53.

The act of grooming has been found to greatly decrease stress, heart rate, and cortisol levels in nonhuman primates; this decrease in stress and cortisol is seen in the animal being groomed, as well as...

National Health and Medical Research Council [NHMRC]. 2016. Principles and guidelines for the care and use of non-human primates for scientific purposes. National Health and Medical Research Council: Canberra, Australia, 25 pp.

The Principles and guidelines for the care and use of non-human primates for scientific purposes is a revision of NHMRC’s Policy on the care and use of non-human primates for scientific purposes 2003 (the Policy)...

Bayne, K. A., Beaver, B. V., Mench, J. A. et al. 2015. Laboratory animal behavior. In: Laboratory Animal Medicine, 3rd edition. Fox, J. G., Anderson, L., Otto, G., et al. (eds). Elsevier, Inc., Amsterdam, NL. pp. 1617-1651.

The study of laboratory animal behavior has increased steadily over the last decade, with expanding emphasis on a variety of commonly used species. In the United States, this trend was initially focused on species for...

Bergman, T. J., Sheehan, M. J. 2013. Social knowledge and signal in primates. American Journal of Primatology 75(7), 683-694.

Primates are notable for having a rich and detailed understanding of their social environment and there has been great interest in the evolution and function of social knowledge in primates. Indeed, primates have been shown...

Reinhardt, V. (ed.) 2013. Compassion Makes a Difference - Discussions by the Laboratory Animal Refinement & Enrichment Forum [LAREF], Volume III. Animal Welfare Institute, Washington, DC.

This is the third volume of discussions that took place on the Laboratory Animal Refinement & Enrichment Forum (LAREF). This forum is dedicated to the exchange of personal experiences of refining the conditions under which...

Hrapkiewicz, K., Colby, L. A., Denison, P. 2013. Clinical Laboratory Animal Medicine: An Introduction (4th Ed). Wiley-Blackwell, Ames, IA.

Clinical Laboratory Animal Medicine: An Introduction, Fourth Edition offers a user-friendly guide to the unique anatomy and physiology, care, common diseases, and treatment of small mammals and nonhuman primates. Carefully designed for ease of use...

Coleman, K. 2012. Individual differences in temperament and behavioral management practices for nonhuman primates. Applied Animal Behaviour Science 137(3-4), 106-113.

This review will examine how individual differences in temperament might affect, or be affected by, behavioral management practices for captive primates. Measuring temperament may help us predict the outcome of social introductions. It can also...

Camacho, J. N., Boskovic, S., Moeller, E. 2012. Improved nonhuman primate social housing using visual cues associated for an intensive research study. American Association for Laboratory Animal Science [AALAS] Meeting Official Program, 636-637 (Abstract #PS35).

Lean management-based visual tools have been used to improve the quality of animal care associated with a complex research study involving immune-compromised cynomolgus monkeys (M. fascicularis) in various postsurgical recovery states. In order to effectively...

Baker, K. C. 2012. Implementation of pair housing for laboratory primates. American Journal of Primatology 74(S1), 31. (35th Meeting of the American Society of Primatologists Scientific Program, Abstract #20)

There is a general consensus among those studying the welfare of captive primates that social housing is the most effective means for promoting psychological well-being. It is well established that socially-housed rhesus macaques (Macaca mulatta)...

Schapiro, S. J., Bernacky, B. J. 2011. Socialization strategies and disease transmission in captive colonies of nonhuman primates. American Journal of Primatology 74(6), 518-527.

In captive research environments for nonhuman primates (NHP), social housing strategies are often in conflict with protocols designed to minimize disease transmission. This is particularly true in breeding colonies, and is especially relevant when attempting...

Egeler, J. L., Hoekwater, S., Hoffman, H. D. 2010. Monitoring program for the treatment of nonhuman primates with behavioral disorders. American Association for Laboratory Animal Science [AALAS] Meeting Official Program, 717 (Abstract #P113).

Maintaining the psychologic wellbeing of nonhuman primates housed in a laboratory setting is an important aspect in providing the best possible care for these animals. Nonhuman primates kept in captivity can begin to display abnormal...

Taylor K. 2010. Reporting the implementation of the three Rs in European primate and mouse research papers: Are we making progress? Alternatives to Laboratory Animals 38(6), 495-517.

It is now more than 20 years since both Council of Europe Convention ETS123 and EU Directive 86/609/EEC were introduced, to promote the implementation of the Three Rs in animal experimentation and to provide guidance...