Refinement Database

Database on Refinement of Housing, Husbandry, Care, and Use of Animals in Research

This database, created in 2000, is updated every four months with newly published scientific articles, books, and other publications related to improving or safeguarding the welfare of animals used in research.

Tips for using the database:

  • This landing page displays all of the publications in the database.
  • Use the drop-down menus to filter these publications by Animal Type, Setting, and/or Topic.
  • Clicking on a parent category (e.g., Rodent) will include publications relating to all the items in that category (e.g., Chinchilla, Gerbil, Guinea Pig, etc.).
  • You may also add a keyword to further narrow your search.
  • Please note that at this time, only publications dated 2010 or later (with some exceptions) can be filtered by Animal Type and Topic, and only publications dated 2020 or later (with some exceptions) can be filtered by Setting. Most publications older than 2010 can only be searched by keyword. 
Ruet, A., Arnould, C., Lemarchand, J. et al. 2022. Horse welfare: A joint assessment of four categories of behavioural indicators using the AWIN protocol, scan sampling and surveys. Animal Welfare 31(4), 455–466.

Domesticated horses (Equus caballus) can be exposed to a compromised welfare state and detecting a deterioration in welfare is essential to modify the animals’ living conditions appropriately. This study focused on four categories of behavioural...

Sohel Khan, A., Lea, S. E. G., Chand, P. et al. 2022. Predictors of psychological stress and behavioural diversity among captive red panda in Indian zoos and their implications for global captive management. Scientific Reports 12(1), 14034.

At high elevations, biodiversity is at elevated risk from extinctions due to rapid environmental changes. In the most of its range in Himalayas, the red panda, an endangered species, is struggling to survive in the...

Wood, L. 2022. Managing long-term wellness in captive sea turtles. Animal Welfare 31(4), 423–432.

Circumstances surrounding advances in stranding response and veterinary care have created a growing need for the long-term housing of captive sea turtles. However, the difficulty in recreating natural conditions in captive settings places a responsibility...

Nurmi, H., Laaksonen, S., Häätylä, T. et al. 2022. The impact of clamp castration on the behaviour and body temperature of reindeer (Rangifer tarandus tarandus) – Effects of local anesthesia and non-steroidal anti-inflammatory drug. Applied Animal Behaviour Science 255, 105719.

Yearly, 2500–4000 reindeer (Rangifer tarandus tarandus) bulls are castrated in Finland, mostly without pain alleviation. No previous research exists concerning pain-related behaviours during castration in reindeer. Our aims were to investigate the effects of Burdizzo...

Booth, D., Kamau, A., Kayondo, H. et al. 2022. Training a giraffe (Giraffa camelopardalis reticulata) for voluntary foot radiographs at Dubai safari park. Journal of Zoological and Botanical Gardens 3(4), 688–698.

When 0.1 Reticulated Giraffe (Giraffa camelopardalis reticulata) began displaying signs of lameness and a persistent swelling of the front left pastern joint, an operant based training program was created for front foot radiographs to diagnose...

Brando, S., Coe, J. 2022. Confronting back-of-house traditions: Primates as a case study. Journal of Zoological and Botanical Gardens 3(3), 366–397.

This review commentary focuses on traditional management practices and facility design with suggested improvements in non-public primate management areas, often called “back-of-house”, (henceforth BOH) in zoos, sanctuaries, and research facilities. Progress has been made toward...

Fieschi-Méric, L., Ellis, C., Servini, F. et al. 2022. An improvement in enclosure design can positively impact welfare, reduce aggressiveness and stabilise hierarchy in captive Galapagos giant tortoises. Journal of Zoological and Botanical Gardens 3(4), 499–512.

The interest in the welfare of zoo animals, from both the public and the scientific community, has long been biased towards mammals. However, growing evidence of the complex behavioural repertoires of less charismatic animals, such...

Free, D., Justice, W. S. M., Smith, S. J. et al. 2022. An approach to assessing zoo animal welfare in a rarely studied species, the common cusimanse Crossarchus obscurus. Journal of Zoological and Botanical Gardens 3(3), 420–441.

Objective welfare assessments play a fundamental role in ensuring that positive welfare is achieved and maintained for animals in captivity. The Animal Welfare Assessment Grid (AWAG), a welfare assessment tool, has been validated for use...

Hepps Keeney, C., Harrison, T. M. 2022. Euthanasia complications in non-domestic species. Journal of Zoological and Botanical Gardens 3(4), 616–623.

There are very few studies describing euthanasia complications in non-domestic species. The goal of this study was to survey veterinarians to determine what complications may commonly occur during the euthanasia of non-domestic species. An online...

Howard, D., Freeman, M. S. 2022. Overlooked and under-studied: A review of evidence-based enrichment in varanidae. Journal of Zoological and Botanical Gardens 3(1), 32–43.

Enrichment has become a key aspect of captive husbandry practices as a means of improving animal welfare by increasing environmental stimuli. However, the enrichment methods that are most effective varies both between and within species...

Walsh, Z. C., Olson, H., Clendening, M. et al. 2022. Social behavior deficiencies in captive American alligators (Alligator mississippiensis). Journal of Zoological and Botanical Gardens 3(1), 131–146.

Understanding how the behavior of captive American alligator (Alligator mississippiensis) congregations compares to wild congregations is essential to assessing the welfare of alligators in captivity. Wild alligator congregations perform complex social behaviors, but it is...

Martínez-Boví, R., Barba, M., Plaza-Dávila, M. et al. 2022. Effect of immunocastration with a gonadotropin-releasing hormone vaccine in a male zebra Equus quagga boehmi. Journal of Zoo and Aquarium Research 10(4), 210–214.

Grant’s zebra Equus quagga boehmi is an equine species commonly bred in zoos under human care. Male zebras are often castrated to prevent a surplus captive zebra population. Gonadotropin-releasing hormone (GnRH) vaccination may pose an...

Sansome, H. 2022. A tale of two sloths. RATEL (Journal of the Association of British and Irish Wild Animal Keepers) 49(3), 6-8.

Designed to improve their welfare by reducing the need for restraint and/or general anesthetic where possible. We have been working to improve the husbandry management of our 1.1 Linne’s two-toed (or fingered) sloths (Choloepus didactylus)...

Whitbread, S. 2022. Some observations on the use of transparent barriers. RATEL (Journal of the Association of British and Irish Wild Animal Keepers) 49(3), 9-13.

What follows are some case studies in which solid but transparent barriers have been used successfully to provide a sense of security to three different mammal taxa (three-banded armadillo; Kirk’s dikdik; black rat) to reduce...

Menchetti, L., Zappaterra, M., Costa, L. N. et al. 2021. Application of a protocol to assess camel welfare: Scoring system of collected measures, aggregated assessment indices, and criteria to classify a pen. Animals 11(2), 494.

This study aimed to apply a protocol for assessing camel welfare, to develop a scoring system for the welfare measures, to produce overall assessment indices, and to classify the animal units (i.e., pens) according to...

Oliveira, A. R., Gozalo-Marcilla, M., Ringer, S. K. et al. 2021. Development, validation, and reliability of a sedation scale in horses (EquiSed). Frontiers in Veterinary Science 8, 611729.

The lack of standardization of sedation scales in horses limits the reproducibility between different studies. This prospective, randomized, blinded, horizontal and controlled trial aimed to validate a scale for sedation in horses (EquiSed). Seven horses...

Padalino, B., Menchetti, L. 2021. The first protocol for assessing welfare of camels. Frontiers in Veterinary Science 7, 631876.

The aim of this study was to develop and describe a protocol for assessing welfare in camels reared in intensive or semi-intensive systems. A literature review was conducted searching for scientific papers on assessment of...

Lambert, K. 2021. DIY: Ice cream cone spiced foraging cups. Laboratory Animal Science Professional 9(1) (January/February), 36.

This DIY snack is great for NHPs and can be customized in a variety of ways.

Lambert, K. 2021. DIY: Ice produce blocks. Laboratory Animal Science Professional 9(2) (March/April), 41.

This great cool-down snack is ideal for group or singly housed swine or nonhuman primates (particularly in larger pen-style housing). This item can be customized for canines as well by modifying the liquid used and/or...

Arena, I., Marliani, G., Sabioni, S. et al. 2021. Assessment of horses’ welfare: Behavioral, hormonal, and husbandry aspects. Journal of Veterinary Behavior 41, 82-90.

Horse practitioners have difficulties with undesirable behaviors exhibited by their horses (Equus caballus), such as cribbing, weaving, or head shaking. It has been suggested that most of behavioral disorders originate from the animals’ attempt to...

Egan, S., Kearney, C. M., Brama, P. A. J. et al. 2021. Exploring stable-based behaviour and behaviour switching for the detection of bilateral pain in equines. Applied Animal Behaviour Science 235, 105214.

Efficient and sensitive animal pain detection approaches are increasingly studied with the goal of improving animal welfare and monitoring the efficacy of treatment and rehabilitation. The aim of this study was to determine the potential...

Stomp, M., d’Ingeo, S., Henry, S. et al. 2021. Brain activity reflects (chronic) welfare state: Evidence from individual electroencephalography profiles in an animal model. Applied Animal Behaviour Science 236, 105271.

Assessing the animal welfare state is a challenge given the subjective individual cognitive and emotional processing involved. Electroencephalography (EEG) spectrum analysis has proved an ecologically valid recording situation to assess the link between brain processes...

Mönki, J., Saastamoinen, M., Karikoski, N. et al. 2021. Effects of bedding material on equine lower airway inflammation: A crossover study comparing peat and wood shavings. Frontiers in Veterinary Science 8, 656814.

Bedding materials affect stable air hygiene, and thus the development and exacerbation of equine asthma. There is limited knowledge concerning the effects of different types of bedding material on equine lower airway inflammation. The objective...

Coleman, K., Shapiro, S. J. (Eds.). 2021. Behavioral Biology of Laboratory Animals (1st ed). CRC Press, Boca Raton, FL.

This 30-chapter volume informs students and professionals about the behavioral biology of animals commonly housed in laboratory and other captive settings. Each species evolved under specific environmental conditions, resulting in unique behavioral patterns, many of...

Martinic, G. 2021. Husbandry and healthcare of the Olive python (Liasis olivaceus). Animal Technology and Welfare 20(1), 44-50.

The article describes the care of the Olive python (Liasis olivaceus) including information on housing, feeding, handling, as well as the general health care of these animals. Some of the information presented is derived from...