Refinement Database

Database on Refinement of Housing, Husbandry, Care, and Use of Animals in Research

This database, created in 2000, is updated every four months with newly published scientific articles, books, and other publications related to improving or safeguarding the welfare of animals used in research.

Tips for using the database:

  • This landing page displays all of the publications in the database.
  • Use the drop-down menus to filter these publications by Animal Type, Setting, and/or Topic.
  • Clicking on a parent category (e.g., Rodent) will include publications relating to all the items in that category (e.g., Chinchilla, Gerbil, Guinea Pig, etc.).
  • You may also add a keyword to further narrow your search.
  • Please note that at this time, only publications dated 2010 or later (with some exceptions) can be filtered by Animal Type and Topic, and only publications dated 2020 or later (with some exceptions) can be filtered by Setting. Most publications older than 2010 can only be searched by keyword. 
Nurmi, H., Laaksonen, S., Häätylä, T. et al. 2022. The impact of clamp castration on the behaviour and body temperature of reindeer (Rangifer tarandus tarandus) – Effects of local anesthesia and non-steroidal anti-inflammatory drug. Applied Animal Behaviour Science 255, 105719.

Yearly, 2500–4000 reindeer (Rangifer tarandus tarandus) bulls are castrated in Finland, mostly without pain alleviation. No previous research exists concerning pain-related behaviours during castration in reindeer. Our aims were to investigate the effects of Burdizzo...

Whoriskey, S., Pearson, L. E., Harris, H. S. et al. 2022. Using a combination of midazolam and butorphanol is a safe and effective reversible field sedation protocol for Weddell seal (Leptonychotes weddellii) pups. Vet Record 191(11), e2238.

Background: Weddell seals (Leptonychotes weddellii) are a well-studied species of phocid with an apparent sensitivity to immobilising agents. Mortality as high as 31% has been reported during field immobilisation. This study investigated the use of...

Bernstein‐Kurtycz, L. M., Wiatroski, K. G., Leeds, A. et al. 2022. About pace: How variations in method and definition affect quantification of pacing in bears. Zoo Biology 41(4), 365-372.

Repetitive pacing behavior is exhibited by many species in zoos and is particularly prevalent in carnivores with large home ranges, such as bears. Pacing can be a behavioral indicator of poor welfare, however, understanding this...

Trondrud, L. M., Ugland, C., Ropstad, E. et al. 2022. Stress responses to repeated captures in a wild ungulate. Scientific Reports 12(1), 16289.

While capture-mark-recapture studies provide essential individual-level data in ecology, repeated captures and handling may impact animal welfare and cause scientific bias. Evaluating the consequences of invasive methodologies should be an integral part of any study...

Zhang, X., Wang, X., Ayala, J. et al. 2022. Possible effects of early maternal separation on the gut microbiota of captive adult giant pandas. Animals 12(19), 2587.

Maternal deprivation (MD) in early life induces dysbiosis in the host gut microbiota, which is a key determinant of abnormal behavior in stress model individuals. Compared with the early parenting environment of the wild, captive...

Nurmi, H., Laaksonen, S., Häätylä, T. et al. 2022. The impact of clamp castration on the behaviour and body temperature of reindeer (Rangifer tarandus tarandus) – Effects of local anesthesia and non-steroidal anti-inflammatory drug. Applied Animal Behaviour Science 255, 105719.

Yearly, 2500–4000 reindeer (Rangifer tarandus tarandus) bulls are castrated in Finland, mostly without pain alleviation. No previous research exists concerning pain-related behaviours during castration in reindeer. Our aims were to investigate the effects of Burdizzo...

Hepps Keeney, C., Harrison, T. M. 2022. Euthanasia complications in non-domestic species. Journal of Zoological and Botanical Gardens 3(4), 616–623.

There are very few studies describing euthanasia complications in non-domestic species. The goal of this study was to survey veterinarians to determine what complications may commonly occur during the euthanasia of non-domestic species. An online...

MacRae, A. M., McGreevy, P., Daros, R. R. et al. 2021. Can eye surface temperature be used to indicate a stress response in harbour seals (Phoca vitulina)? Animal Welfare 30(1), 91-100.

Infra-red thermography (IRT) is increasingly being used to estimate physiological stress responses in animals via changes in eye surface temperature. The aim of this study was to determine whether eye temperature of harbour seals (Phoca...

Skovlund, C. R., Kirchner, M. K., Moos, L. W. et al. 2021. A critical review of animal-based welfare indicators for polar bears (Ursus maritimus) in zoos: Identification and evidence of validity. Animal Welfare 30(1), 1-18.

Captive polar bears (Ursus maritimus) are well-documented as being prone to behavioural disorders and, as a result, their welfare is the cause of increasing concern. There is therefore a need for an evidence-based approach to...

Fernandez, E. J. 2021. Appetitive search behaviors and stereotypies in polar bears (Ursus maritimus). Behavioural Processes 182, 104299.

Stereotypies in captive animals have been defined as repetitive, largely invariant patterns of behavior that serve no obvious goal or function. Stereotypies are commonly attributed to boredom or stress and are typically treated by enriching...

Coleman, K., Shapiro, S. J. (Eds.). 2021. Behavioral Biology of Laboratory Animals (1st ed). CRC Press, Boca Raton, FL.

This 30-chapter volume informs students and professionals about the behavioral biology of animals commonly housed in laboratory and other captive settings. Each species evolved under specific environmental conditions, resulting in unique behavioral patterns, many of...

Whitmer, E. R., Trumbull, E. J., Harris, H. S. et al. 2021. Use of potassium chloride for low-residue euthanasia of anesthetized California sea lions (Zalophus californianus) and northern elephant seals (Mirounga angustirostris) with life-threatening injury or disease. Journal of the AVMA 259(2), 197-201.

BACKGROUND: The need for field euthanasia of pinnipeds occasionally arises for circumstances in which carcass retrieval for disposal is logistically challenging to impossible. This could include mass stranding events, remote field research, or carcasses that...

Alvarez Ramírez, L., Mejía Huerta, N. G., Sánchez Cervantes, A. 2021. Artificial shade effects on behavior and body weight of pregnant grazing red deer (Cervus elaphus). Journal of Veterinary Behavior 44, 32-39.

The study aimed to determine whether artificial shade influences grazing behavior and body weight of pregnant female red deer. Two groups of pregnant does were grazed in enclosures with shade (WS, n = 23), or non-shaded enclosures...

Vonk, J., McGuire, M. C., Johnson-Ulrich, Z. 2021. Bearing fruit: Piloting a novel judgment bias task in an American black bear. Zoo Biology 40(2), 89-97.

Judgment bias tasks can reveal changes in affect in animals as a function of environmental manipulations such as provision of enrichment. We assessed affect in an American black bear across seasonal changes in availability of...

Emmett, C., Digby, M., Pope, J. et al. 2021. Social behaviour in zoo bachelor groups: A case study of related South American fur seals. Animals 11(9), 2682.

Appropriate management of social groups is one of the greatest challenges that face zoos and aquaria worldwide. To facilitate breeding programmes, particularly in polygynous species, there is a need to house surplus males in bachelor...

Bergvall, U. A., Morellet, N., Kjellander, P. et al. 2021. Settle down! Ranging behaviour responses of roe deer to different capture and release methods. Animals 11(11), 3299.

The fitting of tracking devices to wild animals requires capture and handling which causes stress and can potentially cause injury, behavioural modifications that can affect animal welfare and the output of research. We evaluated post...

Maher, C. J., Gibson, A., Dixon, L. M. et al. 2021. Developing a reliable welfare assessment tool for captive hibernatory bear species. Animals 11(11), 3090.

Animal welfare assessments are essential for the identification of welfare hazards and benchmarking of welfare improvements, though welfare assessments for zoo species are lacking. Bears are commonly housed in zoos but currently no composite welfare...

Zemanova, M. A. 2021. Noninvasive genetic assessment is an effective wildlife research tool when compared with other approaches. Genes 12(11), 1672.

Wildlife research has been indispensable for increasing our insight into ecosystem functioning as well as for designing effective conservation measures under the currently high rates of biodiversity loss. Genetic and genomic analyses might be able...

Monreal-Pawlowsky, T., Vaicekauskaitė , R., Palencia Membrive, G. et al. 2021. Goal-oriented behavioural and environmental enrichment in aquarium species. Journal of Zoo and Aquarium Research, 9(4), 273-280.

Environmental enrichment is a common tool used in zoo and aquarium settings to provide mental and physical stimulation to animals under human care. This paper aims to present a primary approach to goal-oriented environmental and...

Bernstein-Kurtycz, L. M., Koester, D. C., Snyder, R. J. et al. 2021. “Bearly” changing with the seasons: Bears of five species show few behavioral changes across seasons and at varying visitor densities. Animal Behavior and Cognition 8(4), 538–557.

In natural environments, bear behavior follows seasonal patterns but the zoo environment differs from the natural environment in several ways, including the presence of zoo visitors. Although typically difficult to disentangle, we were able to...

Fuller, G., Hamilton, J., Allard, S. 2021. DNA damage as a potential non-invasive indicator of welfare: A preliminary study in zoo-housed grizzly bears (Ursus arctos horribilis). Journal of Zoological and Botanical Gardens 2(3), 316–334.

Measures of oxidative stress have potential for integrating positive and negative life experiences into comprehensive cellular indicators of animal welfare. We explored this possibility when three adult grizzly bear brothers at the Detroit Zoo were...

Melfi, V. A., Dorey, N. R., Ward, S. (Eds.) 2020. Zoo Animal Learning and Training. John Wiley & Sons: Hoboken, NJ, 384 pp.

Comprehensively explains animal learning theories and current best practices in animal training within zoos. This accessible, up-to-date book on animal training in a zoo/aquaria context provides a unified approach to zoo animal learning, bringing together...

Harvey, A., Beausoleil, N., Ramp, D. et al. 2020. A ten-stage protocol for assessing the welfare of individual non-captive wild animals: Free-roaming horses (Equus ferus caballus) as an example. Animals 10(1), 148.

Knowledge of the welfare status of wild animals is vital for informing debates about the ways in which we interact with wild animals and their habitats. Currently, there is no published information about how to...

Zemanova, M. A. 2020. Towards more compassionate wildlife research through the 3Rs principles: Moving from invasive to noninvasive methods. Wildlife Biology 2020(1), no page numbers.

Research in ecology and wildlife biology remains crucial for increasing our knowledge and improving species management and conservation in the midst of the current biodiversity crisis. However, obtaining information on population status often involves invasive...

Latham, A., Davidson, B., Warburton, B. et al 2020. Efficacy and animal welfare impacts of novel capture methods for two species of invasive wild mammals in New Zealand. Animals 10(1), 44.

All capture methods impose animal welfare impacts, but these impacts are rarely quantified or reported. We present data from two wildlife capture studies that trialled new methods for capturing Bennett’s wallabies (Notamacropus rufogriseus) and red...