Refinement Database

Database on Refinement of Housing, Husbandry, Care, and Use of Animals in Research

This database, created in 2000, is updated every four months with newly published scientific articles, books, and other publications related to improving or safeguarding the welfare of animals used in research.

Tips for using the database:

  • This landing page displays all of the publications in the database.
  • Use the drop-down menus to filter these publications by Animal Type, Setting, and/or Topic.
  • Clicking on a parent category (e.g., Rodent) will include publications relating to all the items in that category (e.g., Chinchilla, Gerbil, Guinea Pig, etc.).
  • You may also add a keyword to further narrow your search.
  • Please note that at this time, only publications dated 2010 or later (with some exceptions) can be filtered by Animal Type and Topic, and only publications dated 2020 or later (with some exceptions) can be filtered by Setting. Most publications older than 2010 can only be searched by keyword. 
Hankenson, F. C., Pritt, S. 2022. To stay virtual or not to stay virtual? That is the question. Laboratory Animal Science Professional 10(3) (May/June), 34-36.

Both the Office of Laboratory Animal Welfare (OLAW) and the U.S. Department of Agriculture (USDA) released guidance about how to conduct inspections during the pandemic; some of their suggestions may be of value to retain...

Olsson, I. A. S., Nielsen, B. L., Camerlink, I. 2022. An international perspective on ethics approval in animal behaviour and welfare research. Applied Animal Behaviour Science 253, 105658.

Ethics assessment is essential in studies that involve animals as subjects, which includes research on animal behaviour and welfare. Although ethics review mechanisms within institutions are long established in many regions, processes may be non-uniform...

Runde, B. J., Buckel, J. A., Bacheler, N. M. et al. 2022. Evaluation of six methods for external attachment of electronic tags to fish: Assessment of tag retention, growth and fish welfare. Journal of Fish Biology 101(3), 419-430.

External attachment of electronic tags has been increasingly used in fish studies. Many researchers have used ad hoc attachment methods and provided little or no validation for the assumption that tagging itself does not bias...

Lennox, R. J., Stöger, E., Dahlmo, L. S. et al. 2022. Effects of tag type and surgery on migration of Atlantic salmon (Salmo salar) smolts. Journal of Fish Biology 101(3), 515-521.

Tagging salmon smolts to provide information about the timing of outmigration has been a common approach to monitor phenology and model the risk of encountering stressors. However, the validity of tagging has come under scrutiny...

Godoi, T. L. O. S., Nascimento de Souza, R., Nascimento de Godoi, F. et al. 2022. Physiological and behavioral response of foals to hot iron or freeze branding. Journal of Veterinary Behavior 48, 41-48.

Branding horses with permanent marks is still a routine for many breeders in many parts of the world. This method of identification is traditionally done with a hot iron, although cold or freeze branding with...

de Castro Lippi, I. C., Caldara, F. R., de Lima Almeida Paz, I. C. et al. 2022. Global and Brazilian scenario of guidelines and legislation on welfare in pig farming. Animals 12(19), 2615.

The evolution of scientific knowledge regarding animal sentience, together with the growing concerns of consumers regarding current production models, has brought with it the responsibility of reviewing many practices carried out in industrial swine farming...

Nuber, M., Gonzalez-Uarquin, F., Neufurth, M. et al. 2022. Development of a 3D simulator for training the mouse in utero electroporation. PLOS ONE 17(12), e0279004.

In utero electroporation (IUE) requires high-level training in microinjection through the mouse uterine wall into the lateral ventricle of the mouse brain. Training for IUE is currently being performed in live mice as no artificial...

Ruge, L., Mancini, C. 2022. An ethics toolkit to support animal-centered research and design. Frontiers in Veterinary Science 9, 891493.

Designers and researchers who work with animals need to employ an array of ethical competencies to guarantee the welfare of animals taking part in animal-centered research. The emerging field of Animal-Computer Interaction (ACI), which deals...

Brough, D. W., Murkin, J. T., Amos, H. E. et al. 2022. Comparing variability in measurement of subcutaneous tumors in mice using 3D thermal imaging and calipers. Comparative Medicine 72(6), 364–375.

Repeatable tumor measurements are key to accurately assessing tumor growth and treatment efficacy. A preliminary study that we conducted showed that a novel 3D and thermal imaging system (3D-TI) for measuring subcutaneous tumors in rodents...

Bekkozhayeva, D., Cisar, P. 2022. Image-based automatic individual identification of fish without obvious patterns on the body (scale pattern). Applied Sciences 12(11), 5401.

The precision fish farming concept has been widely investigated in research and is highly desirable in aquaculture as it creates opportunities for precisely controlling and monitoring fish cultivation processes and increasing fish welfare. The automatic...

Wilkerson, J., Cavanaugh, K. 2022. As the world turns: Identifying and documenting continuing education for IACUC committee members and staff. Laboratory Animal Science Professional 10(6) (November/December), 36-38.

In this column, we will describe how the IACUC Office at the University of Texas Southwestern Medical Center (UTSW) identifies and documents the participation of IACUC members and staff in continuing education opportunities. The prioritization...

Zeng, Y., Jin, H., Wang, J. et al. 2022. An optimized method for intratracheal instillation in mice. Journal of Pharmacological and Toxicological Methods 118, 107230.

Non-invasive intratracheal instillation is an important method for direct exposure of the respiratory tract which is commonly used in toxicology, environmental science, and other research fields. However, there is no standard operating process for non-invasive...

Ratnayake, M. N., Dyer, A. G., Dorin, A. 2021. Tracking individual honeybees among wildflower clusters with computer vision-facilitated pollinator monitoring. PLOS ONE 16(2), e0239504.

Monitoring animals in their natural habitat is essential for advancement of animal behavioural studies, especially in pollination studies. Non-invasive techniques are preferred for these purposes as they reduce opportunities for research apparatus to interfere with...

Carbone, L. 2021. Estimating mouse and rat use in American laboratories by extrapolation from Animal Welfare Act-regulated species. Scientific Reports 11(1), 493.

Alone among Western nations, the United States has a two-tier system for welfare protections for vertebrate animals in research. Because its Animal Welfare Act (AWA) excludes laboratory rats and mice (RM), government veterinarians do not...

Jörgensen, S., Lindsjö, J., Weber, E. M. et al. 2021. Reviewing the review: A pilot study of the ethical review process of animal research in Sweden. Animals 11(3), 708.

The use of animals in research entails a range of societal and ethical issues, and there is widespread consensus that animals are to be kept safe from unnecessary suffering. Therefore, harm done to animals in...

Codecasa, E., Pageat, P., Marcet-Rius, M. et al. 2021. Legal frameworks and controls for the protection of research animals: A focus on the animal welfare body with a French case study. Animals 11(3), 695.

In recent years, efforts have been devoted to improving the welfare of laboratory animals. Scientific progress and growing concerns over animal harm have pushed institutions to strengthen their laws to make science more humane and...

Rácz, A., Allan, B., Dwyer, T. et al. 2021. Identification of individual zebrafish (Danio rerio): A refined protocol for VIE tagging whilst considering animal welfare and the principles of the 3Rs. Animals 11(3), 616.

In aquatic ecology, studies have commonly employed a tagging technique known as visible implant elastomer (VIE). This method has not been widely adopted by the zebrafish research community and also lacks refinement with regard to...

Kammertoens, T., Jeuthe, S., Baranzke, H. et al. 2021. Breeding and maintenance of immunodeficient mouse lines under SPF conditions—A call for individualized severity analyses and approval procedures. Animals 11(6), 1789.

In the EU, the breeding of genetically modified laboratory animals is, by definition, an animal experiment if the offspring may experience pain, suffering, or harm. In order to determine the actual burden of genetically modified...

Burn, C. C., Mazlan, N. H. B., Chancellor, N. et al. 2021. The pen is milder than the blade: Identification marking mice using ink on the tail appears more humane than ear-punching even with local anaesthetic. Animals 11(6), 1664.

Identification marking mice commonly involves ear-punching with or without anaesthetic, or tail-marking with ink. To identify which is most humane, we marked weanling male BALB/c mice using ear-punching (EP), ear-punching with anaesthetic EMLATM cream (EP+A)...

Dunn, R. 2021. Brexit: A boon or a curse for animals used in scientific procedures? Animals 11(6), 1547.

The UK has long been hailed as one of the world leaders in animal welfare. Within the UK, animals used in experiments are provided some protection under the Animals (Scientific Procedures) Act 1986 (ASPA). This...

Nunamaker, E. A., Davis, S., O’Malley, C. I. et al. 2021. Developing recommendations for cumulative endpoints and lifetime use for research animals. Animals 11(7), 2031.

Research animals are important for scientific advancement, and therefore, their long-term welfare needs to be monitored to not only minimize suffering, but to provide positive affective states and experiences. Currently, there is limited guidance in...

Eggel, M., Würbel, H. 2021. Internal consistency and compatibility of the 3Rs and 3Vs principles for project evaluation of animal research. Laboratory Animals 55(3), 233-243.

Using animals for research raises ethical concerns that are addressed in project evaluation by weighing expected harm to animals against expected benefit to society. A harm–benefit analysis (HBA) relies on two preconditions: (a) the study...

Brunt, M. W., Weary, D. M. 2021. Perceptions of laboratory animal facility managers regarding institutional transparency. PLOS ONE 16(7), e0254279.

Institutions that conduct animal research are often obliged to release some information under various legal or regulatory frameworks. However, within an institution, perspectives on sharing information with the broader public are not well documented. Inside...

Robstad, C. A., Lodberg-Holm, H. K., Mayer, M. et al. 2021. The impact of bio-logging on body weight change of the Eurasian beaver. PLOS ONE 16(12), e0261453.

Bio-logging is a common method to collect ecological data on wild animals, but might also induce stress, reduce body condition, and alter behavior. Eurasian beavers (Castor fiber) are a semi-aquatic and nocturnal species that are...

Kinter, L. B., Johnson, D. K., Weichbrod, R. H. et al. 2021. Fit for Purpose assessment: A new direction for IACUCs. ILAR Journal 62(3), 314–331.

The organization and function of the institutional animal care and use committee (IACUC) is the key component of government regulation and oversight of necessary scientific research using live animals and of AAALAC - International accreditation...